Bartoli Vittorio, Dixon Daniel O R, Gorochowski Thomas E
BrisSynBio, University of Bristol, Bristol, UK.
Department of Engineering Mathematics, University of Bristol, Bristol, UK.
Methods Mol Biol. 2018;1772:399-409. doi: 10.1007/978-1-4939-7795-6_22.
Visualization of complex genetic systems can help efficiently communicate important design features and clearly illustrate overall structures. To aid in the creation of such diagrams, standards such as the Synthetic Biology Open Language Visual (SBOLv) have been established to ensure that specific symbols and shapes convey the same meaning for genetic parts across the field. Here, we describe several ways that the computational tool DNAplotlib can be used to automate the generation of SBOLv standard-compliant diagrams covering simple genetic designs to large libraries of genetic constructs.
复杂遗传系统的可视化有助于高效传达重要的设计特征，并清晰地展示整体结构。为了辅助创建此类图表，已经建立了诸如合成生物学开放语言可视化（SBOLv）等标准，以确保特定的符号和形状对于该领域的遗传元件传达相同的含义。在此，我们描述了几种使用计算工具DNAplotlib自动生成符合SBOLv标准的图表的方法，这些图表涵盖了从简单的遗传设计到大型遗传构建体文库。
