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微生物席中的弱光无氧光合作用与铁 - 硫生物地球化学

Low-Light Anoxygenic Photosynthesis and Fe-S-Biogeochemistry in a Microbial Mat.

作者信息

Haas Sebastian, de Beer Dirk, Klatt Judith M, Fink Artur, Rench Rebecca McCauley, Hamilton Trinity L, Meyer Volker, Kakuk Brian, Macalady Jennifer L

机构信息

Max Planck Institute for Marine Microbiology, Bremen, Germany.

Department of Oceanography, Dalhousie University, Halifax, NS, Canada.

出版信息

Front Microbiol. 2018 Apr 27;9:858. doi: 10.3389/fmicb.2018.00858. eCollection 2018.

DOI:10.3389/fmicb.2018.00858
PMID:29755448
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5934491/
Abstract

We report extremely low-light-adapted anoxygenic photosynthesis in a thick microbial mat in Magical Blue Hole, Abaco Island, The Bahamas. Sulfur cycling was reduced by iron oxides and organic carbon limitation. The mat grows below the halocline/oxycline at 30 m depth on the walls of the flooded sinkhole. irradiance at the mat surface on a sunny December day was between 0.021 and 0.084 μmol photons m s, and UV light (<400 nm) was the most abundant part of the spectrum followed by green wavelengths (475-530 nm). We measured a light-dependent carbon uptake rate of 14.5 nmol C cm d. A 16S rRNA clone library of the green surface mat layer was dominated (74%) by a cluster (>97% sequence identity) of clones affiliated with , a genus within the green sulfur bacteria (GSB), which are obligate anoxygenic phototrophs. Typical photopigments of brown-colored GSB, bacteriochlorophyll and (β-)isorenieratene, were abundant in mat samples and their absorption properties are well-adapted to harvest light in the available green and possibly even UV-A spectra. Sulfide from the water column (3-6 μmol L) was the main source of sulfide to the mat as sulfate reduction rates in the mats were very low (undetectable-99.2 nmol cm d). The anoxic water column was oligotrophic and low in dissolved organic carbon (175-228 μmol L). High concentrations of pyrite (FeS; 1-47 μmol cm) together with low microbial process rates (sulfate reduction, CO fixation) indicate that the mats function as net sulfide sinks mainly by abiotic processes. We suggest that abundant Fe(III) (4.3-22.2 μmol cm) is the major source of oxidizing power in the mat, and that abiotic Fe-S-reactions play the main role in pyrite formation. Limitation of sulfate reduction by low organic carbon availability along with the presence of abundant sulfide-scavenging iron oxides considerably slowed down sulfur cycling in these mats.

摘要

我们报告了在巴哈马阿巴科岛神奇蓝洞的一个厚微生物垫中存在极低光照适应的无氧光合作用。硫循环因氧化铁和有机碳限制而减少。该微生物垫生长在被淹没的沉洞壁上30米深处的盐跃层/氧跃层以下。12月晴天时微生物垫表面的辐照度在0.021至0.084微摩尔光子·米⁻²·秒⁻¹之间,紫外光(<400纳米)是光谱中最丰富的部分,其次是绿色波长(475 - 530纳米)。我们测量到光依赖的碳吸收速率为14.5纳摩尔碳·厘米⁻²·天⁻¹。绿色表面微生物垫层的16S rRNA克隆文库中,74%由与绿硫菌属(GSB)内一个属相关的克隆簇(序列同一性>97%)主导,绿硫菌是专性无氧光合生物。棕色GSB的典型光合色素细菌叶绿素和(β -)异菌绿素在微生物垫样本中含量丰富,它们的吸收特性非常适合在可用的绿色甚至可能的紫外 - A光谱中捕获光。水柱中的硫化物(3 - 6微摩尔·升⁻¹)是微生物垫硫化物的主要来源,因为微生物垫中的硫酸盐还原速率非常低(检测不到 - 99.2纳摩尔·厘米⁻²·天⁻¹)。缺氧水柱是贫营养的,溶解有机碳含量低(175 - 228微摩尔·升⁻¹)。高浓度的黄铁矿(FeS₂;1 - 47微摩尔·厘米⁻³)以及低微生物过程速率(硫酸盐还原、CO₂固定)表明,微生物垫主要通过非生物过程起到硫化物净汇的作用。我们认为,丰富的Fe(III)(4.3 - 22.2微摩尔·厘米⁻³)是微生物垫中氧化能力的主要来源,并且非生物的Fe - S反应在黄铁矿形成中起主要作用。低有机碳可用性对硫酸盐还原的限制以及大量存在的硫化物清除氧化铁极大地减缓了这些微生物垫中的硫循环。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/95fd35ecdf2a/fmicb-09-00858-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/2157bd8c49ca/fmicb-09-00858-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/9bdfb6973c3d/fmicb-09-00858-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/40aa7d63abd6/fmicb-09-00858-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/fd3f31f9b67f/fmicb-09-00858-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/323877854d94/fmicb-09-00858-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/86bbae3545b4/fmicb-09-00858-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/5fb18ff5d0fd/fmicb-09-00858-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/95fd35ecdf2a/fmicb-09-00858-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/2157bd8c49ca/fmicb-09-00858-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/9bdfb6973c3d/fmicb-09-00858-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/40aa7d63abd6/fmicb-09-00858-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/fd3f31f9b67f/fmicb-09-00858-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/323877854d94/fmicb-09-00858-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/86bbae3545b4/fmicb-09-00858-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/5fb18ff5d0fd/fmicb-09-00858-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/5934491/95fd35ecdf2a/fmicb-09-00858-g008.jpg

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2
Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees.交互式生命树(iTOL)v3:用于展示和注释系统发育树及其他树状图的在线工具。
Nucleic Acids Res. 2016 Jul 8;44(W1):W242-5. doi: 10.1093/nar/gkw290. Epub 2016 Apr 19.
3
Global Landscape of Total Organic Carbon, Nitrogen and Phosphorus in Lake Water.湖泊水中总有机碳、氮和磷的全球概况
黑海分层水柱中细菌群落的生态位分割。
Microbiologyopen. 2021 Jun;10(3):e1195. doi: 10.1002/mbo3.1195.
4
The microbial dimension of submarine groundwater discharge: current challenges and future directions.海底地下水排泄的微生物维度:当前的挑战与未来方向。
FEMS Microbiol Rev. 2021 Sep 8;45(5). doi: 10.1093/femsre/fuab010.
5
Anoxygenic photo- and chemo-synthesis of phototrophic sulfur bacteria from an alpine meromictic lake.从高山分层湖中进行厌氧光合和化能合成的光养硫细菌。
FEMS Microbiol Ecol. 2021 Mar 8;97(3). doi: 10.1093/femsec/fiab010.
6
From sunscreens to medicines: Can a dissipation hypothesis explain the beneficial aspects of many plant compounds?从防晒霜到药物:消散假说能否解释许多植物化合物的有益方面?
Phytother Res. 2020 Aug;34(8):1868-1888. doi: 10.1002/ptr.6654. Epub 2020 Mar 12.
7
Development of anchialine cave habitats and karst subterranean estuaries since the last ice age.末次冰期以来洞螈洞穴生境和喀斯特地下河口的演化。
Sci Rep. 2019 Aug 15;9(1):11907. doi: 10.1038/s41598-019-48058-8.
8
Metabolic Capability and Phylogenetic Diversity of Mono Lake during a Bloom of the Eukaryotic Phototroph Picocystis sp. Strain ML.在真核光合生物 Picocystis sp. 株 ML 水华期间,莫诺湖的代谢能力和系统发育多样性。
Appl Environ Microbiol. 2018 Oct 17;84(21). doi: 10.1128/AEM.01171-18. Print 2018 Nov 1.
Sci Rep. 2015 Oct 19;5:15043. doi: 10.1038/srep15043.
4
Pelagic photoferrotrophy and iron cycling in a modern ferruginous basin.现代铁质盆地中的远洋光致铁营养作用与铁循环
Sci Rep. 2015 Sep 8;5:13803. doi: 10.1038/srep13803.
5
Illuminating microbial dark matter in meromictic Sakinaw Lake.揭示萨基诺湖半混合湖层中微生物暗物质
Appl Environ Microbiol. 2014 Nov;80(21):6807-18. doi: 10.1128/AEM.01774-14. Epub 2014 Aug 29.
6
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8
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9
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