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变形链球菌GS-5 gtfC基因的序列分析

Sequence analysis of the gtfC gene from Streptococcus mutans GS-5.

作者信息

Ueda S, Shiroza T, Kuramitsu H K

机构信息

Department of Microbiology-Immunology, Northwestern University Medical and Dental Schools, Chicago, IL 60611.

出版信息

Gene. 1988 Sep 15;69(1):101-9. doi: 10.1016/0378-1119(88)90382-4.

Abstract

The nucleotide sequence of the gtfC gene, which codes for glucosyltransferase synthesizing both water-soluble and water-insoluble glucans, and its flanking regions from Streptococcus mutans GS-5, was determined. Although the gtfC gene (4218 bp) is preceded by a Shine-Dalgarno (SD) sequence, a promoter-like sequence for this gene could not be identified. The gtfC gene product composed of 1375 amino acid residues (approx. 153 kDa) is generally hydrophilic with three small hydrophobic domains. Two direct repeating units were found near the C terminus of the peptide. The gtfC gene has extensive homology with the previously sequenced gtfB gene. The homologous regions correspond to the signal sequence, an internal region, and the direct repeating units of the peptide. An open reading frame preceded by an SD sequence and followed by an inverted repeat sequence was found immediately downstream from the gtfC gene. The combined sequences of the gtfB and gtfC genes as well as flanking regions suggest that the two gtf genes and the small downstream coding region could be coordinately expressed within an operon. The possible evolution of the gtfC gene in S. mutans GS-5 is also discussed.

摘要

测定了变形链球菌GS-5中编码合成水溶性和水不溶性葡聚糖的葡糖基转移酶的gtfC基因的核苷酸序列及其侧翼区域。尽管gtfC基因(4218 bp)之前有一个Shine-Dalgarno(SD)序列,但未能鉴定出该基因的启动子样序列。由1375个氨基酸残基(约153 kDa)组成的gtfC基因产物总体上是亲水性的,有三个小的疏水域。在肽的C末端附近发现了两个直接重复单元。gtfC基因与先前测序的gtfB基因有广泛的同源性。同源区域对应于信号序列、一个内部区域和肽的直接重复单元。在gtfC基因的紧下游发现了一个开放阅读框,其前面有一个SD序列,后面有一个反向重复序列。gtfB和gtfC基因以及侧翼区域的组合序列表明,这两个gtf基因和小的下游编码区域可能在一个操纵子内协调表达。还讨论了变形链球菌GS-5中gtfC基因可能的进化。

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