• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过对两种过表达从南极开花植物中分离出的或的转基因水稻植株进行比较转录组分析,鉴定与增强耐寒性相关的水稻基因。

Identification of Rice Genes Associated With Enhanced Cold Tolerance by Comparative Transcriptome Analysis With Two Transgenic Rice Plants Overexpressing or , Isolated From Antarctic Flowering Plant .

作者信息

Byun Mi Young, Cui Li Hua, Lee Jungeun, Park Hyun, Lee Andosung, Kim Woo Taek, Lee Hyoungseok

机构信息

Unit of Polar Genomics, Korea Polar Research Institute, Incheon, South Korea.

Department of Systems Biology, Yonsei University, Seoul, South Korea.

出版信息

Front Plant Sci. 2018 May 3;9:601. doi: 10.3389/fpls.2018.00601. eCollection 2018.

DOI:10.3389/fpls.2018.00601
PMID:29774046
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5943562/
Abstract

Few plant species can survive in Antarctica, the harshest environment for living organisms. is the only natural grass species to have adapted to and colonized the maritime Antarctic. To investigate the molecular mechanism of the Antarctic adaptation of this plant, we identified and characterized (), which belongs to monocot CBF group IV. The transcript level of in was markedly increased by cold and dehydration stress. To assess the roles of in plants, we generated a -overexpressing transgenic rice plant () and analyzed its abiotic stress response phenotype. displayed enhanced tolerance to cold stress without growth retardation under any condition compared to wild-type plants. Because the cold-specific phenotype of was similar to that of (Byun et al., 2015), we screened for the genes responsible for the improved cold tolerance in rice by selecting differentially regulated genes in both transgenic rice lines. By comparative transcriptome analysis using RNA-seq, we identified 9 and 15 genes under normal and cold-stress conditions, respectively, as putative downstream targets of the two CBFs. Overall, our results suggest that Antarctic hairgrass mediates the cold-stress response of transgenic rice plants by adjusting the expression levels of a set of stress-responsive genes in transgenic rice plants. Moreover, selected downstream target genes will be useful for genetic engineering to enhance the cold tolerance of cereal plants, including rice.

摘要

很少有植物物种能在南极洲生存,那里是最恶劣的生物生存环境。南极发草是唯一一种适应并在南极海洋地区定殖的天然禾本科物种。为了研究这种植物适应南极环境的分子机制,我们鉴定并表征了属于单子叶植物CBF第四组的DcCBF4。在南极发草中,DcCBF4的转录水平在低温和脱水胁迫下显著增加。为了评估DcCBF4在植物中的作用,我们构建了过表达DcCBF4的转基因水稻植株(DcCBF4-OE),并分析了其非生物胁迫响应表型。与野生型植株相比,DcCBF4-OE在任何条件下对低温胁迫均表现出增强的耐受性且无生长迟缓现象。由于DcCBF4-OE的低温特异性表型与OsCBF4-OE相似(Byun等人,2015年),我们通过选择两个转基因水稻品系中差异表达的基因,筛选出了负责水稻耐寒性提高的基因。通过使用RNA测序进行比较转录组分析,我们分别在正常和低温胁迫条件下鉴定出9个和15个基因,作为两个DcCBF的假定下游靶标。总体而言,我们的结果表明,南极发草通过调节转基因水稻植株中一组胁迫响应基因的表达水平,介导了转基因水稻植株的低温胁迫响应。此外,所选的下游靶标基因将有助于通过基因工程提高包括水稻在内的谷类植物的耐寒性。

相似文献

1
Identification of Rice Genes Associated With Enhanced Cold Tolerance by Comparative Transcriptome Analysis With Two Transgenic Rice Plants Overexpressing or , Isolated From Antarctic Flowering Plant .通过对两种过表达从南极开花植物中分离出的或的转基因水稻植株进行比较转录组分析,鉴定与增强耐寒性相关的水稻基因。
Front Plant Sci. 2018 May 3;9:601. doi: 10.3389/fpls.2018.00601. eCollection 2018.
2
Constitutive expression of DaCBF7, an Antarctic vascular plant Deschampsia antarctica CBF homolog, resulted in improved cold tolerance in transgenic rice plants.南极维管植物南极发草CBF同源基因DaCBF7的组成型表达,使转基因水稻植株的耐寒性得到提高。
Plant Sci. 2015 Jul;236:61-74. doi: 10.1016/j.plantsci.2015.03.020. Epub 2015 Apr 3.
3
Poaceae Type II Galactinol Synthase 2 from Antarctic Flowering Plant Deschampsia antarctica and Rice Improves Cold and Drought Tolerance by Accumulation of Raffinose Family Oligosaccharides in Transgenic Rice Plants.南极植物 Deschampsia antarctica 和水稻的禾本科 II 型半乳糖苷合成酶 2 通过在转基因水稻植株中积累棉子糖家族寡糖提高了耐冷和耐旱性。
Plant Cell Physiol. 2020 Jan 1;61(1):88-104. doi: 10.1093/pcp/pcz180.
4
Abiotic Stress-Induced From Enhanced Cold Tolerance When Constitutively Expressed in Rice.在水稻中组成型表达时由非生物胁迫诱导增强的耐寒性。
Front Plant Sci. 2021 Sep 28;12:734500. doi: 10.3389/fpls.2021.734500. eCollection 2021.
5
Functional analysis of rice DREB1/CBF-type transcription factors involved in cold-responsive gene expression in transgenic rice.参与转基因水稻中冷响应基因表达的水稻DREB1/CBF型转录因子的功能分析
Plant Cell Physiol. 2006 Jan;47(1):141-53. doi: 10.1093/pcp/pci230. Epub 2005 Nov 12.
6
Transcriptome sequencing of the Antarctic vascular plant Deschampsia antarctica Desv. under abiotic stress.南极植物 Deschampsia antarctica Desv. 在非生物胁迫下的转录组测序。
Planta. 2013 Mar;237(3):823-36. doi: 10.1007/s00425-012-1797-5. Epub 2012 Nov 8.
7
Ice recrystallization inhibition proteins (IRIPs) and freeze tolerance in the cryophilic Antarctic hair grass Deschampsia antarctica E. Desv.冰重结晶抑制蛋白(IRIPs)与嗜冷南极发草(Deschampsia antarctica E. Desv.)的抗冻性
Plant Cell Environ. 2009 Apr;32(4):336-48. doi: 10.1111/j.1365-3040.2008.01925.x.
8
Ectopic Expression of , a Member of the OsDREB1 Subfamily, Confers Cold Stress Tolerance in Rice.水稻中OsDREB1亚家族成员的异位表达赋予其耐冷性。
Front Plant Sci. 2019 Mar 28;10:297. doi: 10.3389/fpls.2019.00297. eCollection 2019.
9
Transcriptome Analysis of Diurnal and Nocturnal-Warmed Plants, the Molecular Mechanism Underlying Cold Deacclimation Response in .昼夜升温植物的转录组分析,揭示. 植物冷驯化反应的分子机制
Int J Mol Sci. 2023 Jul 7;24(13):11211. doi: 10.3390/ijms241311211.
10
Cold acclimation induces rapid and dynamic changes in freeze tolerance mechanisms in the cryophile Deschampsia antarctica E. Desv.冷驯化诱导耐寒机制在耐寒植物南极发草 Deschampsia antarctica E. Desv. 中发生快速而动态的变化。
Plant Cell Environ. 2012 Apr;35(4):829-37. doi: 10.1111/j.1365-3040.2011.02456.x. Epub 2011 Dec 4.

引用本文的文献

1
Time-course transcriptome analysis reveals gene co-expression networks and transposable element responses to cold stress in cotton.时间进程转录组分析揭示了棉花中基因共表达网络及转座元件对冷胁迫的响应。
BMC Genomics. 2025 Mar 12;26(1):235. doi: 10.1186/s12864-025-11433-z.
2
Comparative Transcriptomic Analysis and Candidate Gene Identification for Wild Rice (GZW) and Cultivated Rice (R998) Under Low-Temperature Stress.低温胁迫下野生稻(GZW)和栽培稻(R998)的比较转录组分析及候选基因鉴定
Int J Mol Sci. 2024 Dec 13;25(24):13380. doi: 10.3390/ijms252413380.
3
Transcriptome Analysis of Diurnal and Nocturnal-Warmed Plants, the Molecular Mechanism Underlying Cold Deacclimation Response in .

本文引用的文献

1
Transcriptome Profiling Reveals the Negative Regulation of Multiple Plant Hormone Signaling Pathways Elicited by Overexpression of C-Repeat Binding Factors.转录组分析揭示了C-重复结合因子过表达引发的多种植物激素信号通路的负调控。
Front Plant Sci. 2017 Sep 21;8:1647. doi: 10.3389/fpls.2017.01647. eCollection 2017.
2
Photosynthetic limitations in two Antarctic vascular plants: importance of leaf anatomical traits and Rubisco kinetic parameters.两种南极维管植物的光合限制:叶片解剖特征和 Rubisco 动力学参数的重要性。
J Exp Bot. 2017 May 17;68(11):2871-2883. doi: 10.1093/jxb/erx148.
3
Multifunctional Roles of Plant Dehydrins in Response to Environmental Stresses.
昼夜升温植物的转录组分析,揭示. 植物冷驯化反应的分子机制
Int J Mol Sci. 2023 Jul 7;24(13):11211. doi: 10.3390/ijms241311211.
4
How Does Diurnal and Nocturnal Warming Affect the Freezing Resistance of Antarctic Vascular Plants?昼夜变暖和夜间变暖如何影响南极维管植物的抗冻性?
Plants (Basel). 2023 Feb 10;12(4):806. doi: 10.3390/plants12040806.
5
CROWN ROOTLESS1 binds DNA with a relaxed specificity and activates OsROP and OsbHLH044 genes involved in crown root formation in rice.CROWN ROOTLESS1 以一种松弛的特异性结合 DNA,并激活 OsROP 和 OsbHLH044 基因,这些基因参与水稻冠根的形成。
Plant J. 2022 Jul;111(2):546-566. doi: 10.1111/tpj.15838. Epub 2022 Jul 9.
6
Can we improve the chilling tolerance of maize photosynthesis through breeding?我们能否通过培育来提高玉米光合作用的抗冷能力?
J Exp Bot. 2022 May 23;73(10):3138-3156. doi: 10.1093/jxb/erac045.
7
Abiotic Stress-Induced From Enhanced Cold Tolerance When Constitutively Expressed in Rice.在水稻中组成型表达时由非生物胁迫诱导增强的耐寒性。
Front Plant Sci. 2021 Sep 28;12:734500. doi: 10.3389/fpls.2021.734500. eCollection 2021.
8
Characterization of the DREBA4-Type Transcription Factor (SlDREBA4), Which Contributes to Heat Tolerance in Tomatoes.对番茄耐热相关转录因子DREBA4型(SlDREBA4)的特性分析
Front Plant Sci. 2020 Sep 30;11:554520. doi: 10.3389/fpls.2020.554520. eCollection 2020.
9
Correlation analysis of cold-related gene expression with physiological and biochemical indicators under cold stress in oil palm.油棕在冷胁迫下与冷相关基因表达的生理生化指标的相关分析。
PLoS One. 2019 Nov 27;14(11):e0225768. doi: 10.1371/journal.pone.0225768. eCollection 2019.
10
A -3 Fatty Acid Desaturase Gene, Enhances Cold Tolerance and Seed Germination Rate under Low Temperature in Rice.-3 脂肪酸去饱和酶基因增强水稻在低温下的耐寒性和种子发芽率。
Int J Mol Sci. 2019 Aug 3;20(15):3796. doi: 10.3390/ijms20153796.
植物脱水素在应对环境胁迫中的多功能作用
Front Plant Sci. 2017 Jun 9;8:1018. doi: 10.3389/fpls.2017.01018. eCollection 2017.
4
agriGO v2.0: a GO analysis toolkit for the agricultural community, 2017 update.agriGO v2.0:农业社区的 GO 分析工具包,2017 年更新。
Nucleic Acids Res. 2017 Jul 3;45(W1):W122-W129. doi: 10.1093/nar/gkx382.
5
Dirigent proteins in plants: modulating cell wall metabolism during abiotic and biotic stress exposure.植物中的定向蛋白:在非生物和生物胁迫暴露期间调节细胞壁代谢
J Exp Bot. 2017 Jun 15;68(13):3287-3301. doi: 10.1093/jxb/erx141.
6
Overexpression of Dehydrin Genes in Tobacco Enhances Tolerance to Cold and Drought.脱水素基因在烟草中的过表达增强了其对寒冷和干旱的耐受性。
Front Plant Sci. 2017 Feb 7;8:151. doi: 10.3389/fpls.2017.00151. eCollection 2017.
7
Modulating Expression Improves Drought Tolerance in .调节表达可提高[具体植物名称]的耐旱性。(原文中“. ”部分缺失关键信息)
Front Plant Sci. 2017 Jan 24;8:52. doi: 10.3389/fpls.2017.00052. eCollection 2017.
8
Homologous U-box E3 Ubiquitin Ligases OsPUB2 and OsPUB3 Are Involved in the Positive Regulation of Low Temperature Stress Response in Rice ( L.).同源U-box E3泛素连接酶OsPUB2和OsPUB3参与水稻对低温胁迫反应的正向调控
Front Plant Sci. 2017 Jan 20;8:16. doi: 10.3389/fpls.2017.00016. eCollection 2017.
9
A thaumatin-like protein of Ocimum basilicum confers tolerance to fungal pathogen and abiotic stress in transgenic Arabidopsis.罗勒的一种类甜蛋白赋予转基因拟南芥对真菌病原体和非生物胁迫的耐受性。
Sci Rep. 2016 May 6;6:25340. doi: 10.1038/srep25340.
10
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
Mol Biol Evol. 2016 Jul;33(7):1870-4. doi: 10.1093/molbev/msw054. Epub 2016 Mar 22.