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海洋真菌中参与倍半萜生物合成的酶的鉴定

Identification of Enzymes Involved in Sesterterpene Biosynthesis in Marine Fungi.

作者信息

Yan Jingjing, Guo Jingjing, Yuan Wei, Mai Wanying, Hong Kui

机构信息

Key Laboratory of Combinatorial Biosynthesis and Drug Discovery, Ministry of Education, and Wuhan University School of Pharmaceutical Sciences, Wuhan University, Wuhan, China.

Key Laboratory of Combinatorial Biosynthesis and Drug Discovery, Ministry of Education, and Wuhan University School of Pharmaceutical Sciences, Wuhan University, Wuhan, China.

出版信息

Methods Enzymol. 2018;604:441-498. doi: 10.1016/bs.mie.2018.04.023. Epub 2018 May 2.

Abstract

Diverse and bioactive terpene compounds are produced by marine fungi. The biosynthesis of sesterterpene molecules containing a C25 skeleton is catalyzed by chimeric enzymes that carry out both chain elongation and terpene cyclization reactions. These bifunctional characteristics facilitate using different chain length polyisoprenoid diphosphates as precursors to yield the geranylfarnesyl diphosphate intermediate, which is then converted to a sesterterpene in one step. In this chapter, we describe the identification of sesterterpene synthase enzymes, together with other related enzymes such as diterpene and farnesyl diphosphate synthases, in a single fungal strain. The processes are based on genome sequencing, in silico analysis of terpene synthase, in vivo gene (cluster) deletion and complementation, and in vitro protein function verification, together with the methods of detecting terpenes using high-performance liquid chromatography (HPLC) and gas chromatography-mass spectrometry (GC-MS).

摘要

海洋真菌能产生多样且具有生物活性的萜类化合物。含有C25骨架的倍半萜烯分子的生物合成由嵌合酶催化,这些酶同时进行链延长和萜烯环化反应。这些双功能特性有利于使用不同链长的聚异戊二烯二磷酸作为前体,生成香叶基法呢基二磷酸中间体,然后该中间体一步转化为倍半萜烯。在本章中,我们描述了在单一真菌菌株中倍半萜烯合酶以及其他相关酶(如二萜烯和法呢基二磷酸合酶)的鉴定过程。这些过程基于基因组测序、萜烯合酶的计算机分析、体内基因(簇)缺失与互补以及体外蛋白质功能验证,同时还包括使用高效液相色谱(HPLC)和气相色谱 - 质谱联用(GC - MS)检测萜类化合物的方法。

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