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乔氏拟芽孢杆菌新种,从马努斯盆地帕卡马努斯的深海沉积物中分离得到。

Fictibacillus iocasae sp. nov., isolated from the deep-sea sediment in Pacmanus, Manus Basin.

作者信息

Wang Hai-Liang, Zhang Jian, Sun Li

机构信息

Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, Qingdao, 266071, China.

Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.

出版信息

Arch Microbiol. 2018 Sep;200(7):1123-1128. doi: 10.1007/s00203-018-1527-x. Epub 2018 May 25.

Abstract

A novel bacterium, designed strain S38, was isolated from the deep-sea sediment of Pacmanus hydrothermal field in Manus Basin. The isolate was gram-positive, aerobic, motile, and was defined by endospore-forming rods. Strain S38 grew at 16-38 °C, pH 6-8, and in the presence of 0-7% (w/v) NaCl. Based on 16S rRNA gene sequence, S38 was grouped into the genus Fictibacillus and was most closely related to Fictibacillus phosphorivorans CCM 8426 (97.8%), Fictibacillus nanhaiensis DSM 23009 (97.8%), Fictibacillus halophilus DSM 100124 (97.7%), and Fictibacillus barbaricus DSM 14730 (97.5%). The diagnostic diamino acid of the cell wall was meso-diaminopimelic acid. The major fatty acids were iso-C and anteiso-C. MK-7 was the predominant respiratory quinone and diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine were the major polar lipids. The genomic DNA G + C content was 46.8 mol%. Phylogenetic analysis, DNA-DNA relatedness, and phenotypic characteristics supported that strain S38 represents a novel species within the genus Fictibacillus, for which the name Fictibacillus iocasae sp. nov. was proposed. The type strain is S38 (= KCTC 33865 = DSM 104298 = CGMCC 1.16031).

摘要

从马努斯盆地帕卡马努斯热液区的深海沉积物中分离出一种新型细菌,命名为菌株S38。该分离株为革兰氏阳性、需氧、运动型,由产芽孢杆菌定义。菌株S38在16-38℃、pH值6-8以及0-7%(w/v)NaCl存在的条件下生长。基于16S rRNA基因序列,S38被归类到虚构芽孢杆菌属,与嗜磷虚构芽孢杆菌CCM 8426(97.8%)、南海虚构芽孢杆菌DSM 23009(97.8%)、嗜盐虚构芽孢杆菌DSM 100124(97.7%)和野蛮虚构芽孢杆菌DSM 14730(97.5%)关系最为密切。细胞壁的诊断性二氨基酸为内消旋二氨基庚二酸。主要脂肪酸为异-C和anteiso-C。MK-7是主要的呼吸醌,双磷脂酰甘油、磷脂酰甘油和磷脂酰乙醇胺是主要的极性脂质。基因组DNA G+C含量为46.8mol%。系统发育分析、DNA-DNA相关性分析和表型特征支持菌株S38代表虚构芽孢杆菌属内的一个新物种,为此提出了新种名海洋虚构芽孢杆菌。模式菌株为S38(=KCTC 33865=DSM 104298=CGMCC 1.16031)。

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