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极简朊病毒启发的极性自组装肽。

Minimalist Prion-Inspired Polar Self-Assembling Peptides.

机构信息

Institut de Biotecnologia i de Biomedicina and Departament de Bioquímica i Biologia Molecular , Universitat Autònoma de Barcelona , 08193 Bellaterra, Barcelona , Spain.

Institut de Ciència de Materials de Barcelona, Campus UAB , 08193 Bellaterra, Barcelona , Spain.

出版信息

ACS Nano. 2018 Jun 26;12(6):5394-5407. doi: 10.1021/acsnano.8b00417. Epub 2018 Jun 4.

Abstract

Nature provides copious examples of self-assembling supramolecular nanofibers. Among them, amyloid structures have found amazing applications as advanced materials in fields such as biomedicine and nanotechnology. Prions are a singular subset of proteins able to switch between a soluble conformation and an amyloid state. The ability to transit between these two conformations is encoded in the so-called prion domains (PrDs), which are long and disordered regions of low complexity, enriched in polar and uncharged amino acids such as Gln, Asn, Tyr, Ser, and Gly. The polar nature of PrDs results in slow amyloid formation, which allows kinetic control of fiber assembly. This approach has been exploited for fabrication of multifunctional materials because in contrast to most amyloids, PrDs lack hydrophobic stretches that can nucleate their aggregation, their assembly depends on the establishment of a large number of weak interactions along the complete domain. The length and low complexity of PrDs make their chemical synthesis for applied purposed hardly affordable. Here, we designed four minimalist polar binary patterned peptides inspired in PrDs, which include the [Q/N/G/S]-Y-[Q/N/G/S] motif frequently observed in these domains: NYNYNYN, QYQYQYQ, SYSYSYS, and GYGYGYG. Despite their small size, they all recapitulate the properties of full-length PrDs, self-assembling into nontoxic amyloids under physiological conditions. Thus, they constitute small building blocks for the construction of tailored prion-inspired nanostructures. We exploited Tyr residues in these peptides to generate highly stable dityrosine cross-linked assemblies for the immobilization of metal nanoparticles in the fibrils surface and to develop an electrocatalytic amyloid scaffold. Moreover, we show that the shorter and more polar NYNNYN, QYQQYQ, and SYSSYS hexapeptides also self-assemble into amyloid-like structures, consistent with the presence of these tandem motifs in human prion-like proteins.

摘要

自然界提供了丰富的自组装超分子纳米纤维的例子。其中,淀粉样结构已在生物医学和纳米技术等领域作为先进材料得到了惊人的应用。朊病毒是一类能够在可溶性构象和淀粉样状态之间转换的特殊蛋白质。这种在两种构象之间转换的能力被编码在所谓的朊病毒结构域(PrD)中,这些结构域是长而无序的低复杂度区域,富含极性和不带电的氨基酸,如 Gln、Asn、Tyr、Ser 和 Gly。PrD 的极性导致淀粉样形成缓慢,从而允许对纤维组装进行动力学控制。这种方法已被用于制造多功能材料,因为与大多数淀粉样蛋白不同,PrD 缺乏可以引发其聚集的疏水性延伸,其组装取决于沿整个结构域建立大量弱相互作用。PrD 的长度和低复杂度使得它们的化学合成难以用于实际应用。在这里,我们设计了四个受 PrD 启发的最小化极性二元图案肽,其中包括在这些结构域中经常观察到的 [Q/N/G/S]-Y-[Q/N/G/S] 基序:NYNYNYN、QYQYQYQ、SYSYSYS 和 GYGYGYG。尽管它们的尺寸很小,但它们都再现了全长 PrD 的特性,在生理条件下自组装成无毒的淀粉样纤维。因此,它们构成了构建定制化朊病毒启发的纳米结构的小型构建块。我们利用这些肽中的 Tyr 残基来生成高度稳定的二酪氨酸交联组装体,用于将金属纳米颗粒固定在纤维表面,并开发出一种电催化淀粉样支架。此外,我们表明,更短和更极性的 NYNNYN、QYQQYQ 和 SYSSYS 六肽也自组装成类似淀粉样的结构,这与人类朊病毒样蛋白中存在这些串联基序一致。

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