PHD 指状蛋白 1(PHF1)是组蛋白 H4R3 对称二甲基化的新型阅读器,与 PRMT5-WDR77/CRL4B 复合物协同促进肿瘤发生。

PHD finger protein 1 (PHF1) is a novel reader for histone H4R3 symmetric dimethylation and coordinates with PRMT5-WDR77/CRL4B complex to promote tumorigenesis.

机构信息

2011 Collaborative Innovation Center of Tianjin for Medical Epigenetics, Tianjin Key Laboratory of Cellular and Molecular Immunology, Key Laboratory of Immune Microenvironment and Disease (Ministry of Education), Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Tianjin Medical University, Tianjin 300070, China.

Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Capital Medical University, Beijing 100069, China.

出版信息

Nucleic Acids Res. 2018 Jul 27;46(13):6608-6626. doi: 10.1093/nar/gky461.

Abstract

Histone post-translational modifications regulate chromatin structure and function largely through interactions with effector proteins that often contain multiple histone-binding domains. PHF1 [plant homeodomain (PHD) finger protein 1], which contains two kinds of histone reader modules, a Tudor domain and two PHD fingers, is an essential factor for epigenetic regulation and genome maintenance. While significant progress has been made in characterizing the function of the Tudor domain, the roles of the two PHD fingers are poorly defined. Here, we demonstrated that the N-terminal PHD finger of PHF1 recognizes symmetric dimethylation of H4R3 (H4R3me2s) catalyzed by PRMT5-WDR77. However, the C-terminal PHD finger of PHF1, instead of binding to modified histones, directly interacts with DDB1, the main component of the CUL4B-Ring E3 ligase complex (CRL4B), which is responsible for H2AK119 mono-ubiquitination (H2AK119ub1). We showed that PHF1, PRMT5-WDR77, and CRL4B reciprocally interact with one another and collaborate as a functional unit. Genome-wide analysis of PHF1/PRMT5/CUL4B targets identified a cohort of genes including E-cadherin and FBXW7, which are critically involved in cell growth and migration. We demonstrated that PHF1 promotes cell proliferation, invasion, and tumorigenesis in vivo and in vitro and found that its expression is markedly upregulated in a variety of human cancers. Our data identified a new reader for H4R3me2s and provided a molecular basis for the functional interplay between histone arginine methylation and ubiquitination. The results also indicated that PHF1 is a key factor in cancer progression, supporting the pursuit of PHF1 as a target for cancer therapy.

摘要

组蛋白翻译后修饰主要通过与效应蛋白相互作用来调节染色质结构和功能,而这些效应蛋白通常含有多个组蛋白结合结构域。PHF1(plant homeodomain [PHD] finger protein 1)包含两种组蛋白读取模块,一个 Tudor 结构域和两个 PHD 手指,是表观遗传调控和基因组维持的必需因子。虽然 Tudor 结构域的功能已经得到了充分的描述,但两个 PHD 手指的作用还没有被明确界定。在这里,我们证明了 PHF1 的 N 端 PHD 手指识别由 PRMT5-WDR77 催化的 H4R3 的对称二甲基化(H4R3me2s)。然而,PHF1 的 C 端 PHD 手指不是与修饰的组蛋白结合,而是直接与 DDB1 相互作用,DDB1 是 CUL4B-Ring E3 连接酶复合物(CRL4B)的主要组成部分,负责 H2AK119 单泛素化(H2AK119ub1)。我们表明,PHF1、PRMT5-WDR77 和 CRL4B 相互作用,并作为一个功能单元协同作用。PHF1/PRMT5/CUL4B 靶基因的全基因组分析确定了一组基因,包括 E-cadherin 和 FBXW7,它们在细胞生长和迁移中起着至关重要的作用。我们证明 PHF1 促进体内和体外的细胞增殖、侵袭和肿瘤发生,并发现其在多种人类癌症中表达显著上调。我们的数据确定了 H4R3me2s 的一个新的读取器,并为组蛋白精氨酸甲基化和泛素化之间的功能相互作用提供了分子基础。研究结果还表明 PHF1 是癌症进展的关键因素,支持将 PHF1 作为癌症治疗的靶点进行研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8436/6061854/176b4ca435ab/gky461fig1.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索