MOE Key Laboratory of Bioinformatics, Tsinghua University, Beijing, China.
School of Life Sciences, Tsinghua University, Beijing, China.
Cancer Res. 2018 Aug 1;78(15):4138-4149. doi: 10.1158/0008-5472.CAN-18-0688. Epub 2018 Jun 5.
The long noncoding RNA nuclear-enriched abundant transcript 1 (NEAT1) has been shown to regulate multiple cancer-related cellular activities including cell proliferation, apoptosis, and migration. In this study, we confirm that repression of NEAT1 induces DNA damage, disturbs the cell cycle, and arrests the proliferation of prostate cancer cells. By taking advantage of the prostate cancer tumor transcriptome profiles from The Cancer Genome Atlas, our data-mining pipeline identified a series of transcription factors (TF) whose regulatory activities on target genes depended on the level of NEAT1. Among them was putative TF CDC5L, which bound directly to NEAT1. Silencing NEAT1 in prostate cancer cells repressed the transcriptional activity of CDC5L, and RNA-seq and ChIP-seq analyses further revealed a handful of potential targets of CDC5L regulated by NEAT1 expression. One target of CDC5L, ARGN, mediated the strong phenotypic consequences of NEAT1 reduction, including DNA damage, cell-cycle dysregulation, and proliferation arrest. In summary, we have established the requirement of the CDC5L-AGRN circuit for the essential oncogenic role of NEAT1 in prostate cancer cells. An integrative methodology uncovers CDC5L-AGRN signaling as critical to the tumor-promoting function of long noncoding RNA NEAT1 in prostate cancer cells. .
长链非编码 RNA 核丰富丰富转录物 1(NEAT1)已被证明可调节多种与癌症相关的细胞活动,包括细胞增殖、凋亡和迁移。在这项研究中,我们证实抑制 NEAT1 会诱导 DNA 损伤,扰乱细胞周期,并阻止前列腺癌细胞的增殖。利用来自癌症基因组图谱的前列腺癌肿瘤转录组谱,我们的数据挖掘管道鉴定了一系列转录因子(TF),其对靶基因的调节活性取决于 NEAT1 的水平。其中包括假定的 TF CDC5L,它直接与 NEAT1 结合。在前列腺癌细胞中沉默 NEAT1 会抑制 CDC5L 的转录活性,RNA-seq 和 ChIP-seq 分析进一步揭示了受 NEAT1 表达调控的少数潜在 CDC5L 靶标。CDC5L 的一个靶标 ARGN 介导了 NEAT1 减少的强烈表型后果,包括 DNA 损伤、细胞周期失调和增殖停滞。总之,我们已经确立了 CDC5L-ARGN 电路对于 NEAT1 在前列腺癌细胞中发挥基本致癌作用的必要性。综合方法揭示了 CDC5L-ARGN 信号对于长链非编码 RNA NEAT1 在前列腺癌细胞中的肿瘤促进功能至关重要。