Department of Physics, Freie Universität Berlin, Berlin, Germany.
Department of Physics, Freie Universität Berlin, Berlin, Germany.
Biophys J. 2018 Jun 5;114(11):2653-2664. doi: 10.1016/j.bpj.2018.04.041.
Using stochastic simulations, we study the influence of spatial disorder on the diffusion of a single particle through a gel that consists of rigid, straight fibers. The interaction between the particle and the gel fibers consists of an invariant short-range repulsion, the steric part, and an interaction part that can be attractive or repulsive and of varying range. The effect that spatial disorder of the gel structure has on the particle diffusivity depends crucially on the presence of nonsteric interactions. For attractive interactions, disorder slows down diffusion, because in disordered gels, the particle becomes strongly trapped in regions of locally increased fiber density. For repulsive interactions, the diffusivity is minimal for intermediate disorder strength, because highly disordered lattices exhibit abundant passageways of locally low fiber density. The comparison with experimental data on protein and fluorophore diffusion through various hydrogels is favorable. Our findings shed light on particle-diffusion mechanisms in biogels and thus on biological barrier properties, which can be helpful for the optimal design of synthetic diffusors as well as synthetic mucus constructs.
我们利用随机模拟研究了空间无序对单个粒子通过由刚性直纤维组成的凝胶扩散的影响。粒子与凝胶纤维之间的相互作用包括不变的短程排斥力(即空间位阻部分)和具有不同范围的吸引力或排斥力的相互作用部分。凝胶结构的空间无序对粒子扩散率的影响取决于非空间位阻相互作用的存在。对于吸引力相互作用,无序会减缓扩散,因为在无序的凝胶中,粒子在局部纤维密度增加的区域中被强烈捕获。对于排斥相互作用,在中间无序强度下,扩散率最小,因为高度无序的晶格具有丰富的局部低纤维密度的通道。与各种水凝胶中蛋白质和荧光染料扩散的实验数据的比较是有利的。我们的发现揭示了生物凝胶中粒子扩散机制,从而揭示了生物屏障特性,这对于合成扩散器以及合成黏液结构的最佳设计是有帮助的。