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帕图依血清群(属;科)的遗传特征及埃斯特罗_real 病毒属于该属的证据

Genetic Characterization of the Patois Serogroup (Genus ; Family ) and Evidence That Estero Real Virus is a Member of the Genus .

机构信息

Department of Pathology, University of Texas Medical Branch, Galveston, Texas.

Center for Tropical Diseases, Galveston, Texas.

出版信息

Am J Trop Med Hyg. 2018 Aug;99(2):451-457. doi: 10.4269/ajtmh.18-0201. Epub 2018 Jun 7.

Abstract

Estero Real virus (ERV) was isolated in 1980 from ticks collected in El Estero Real, Sancti Spiritus, Cuba. Antigenic characterization of the isolate based on serological methods found a relationship with Abras and Zegla viruses and, consequently, the virus was classified taxonomically within the Patois serogroup. Given the fact that genetic characterization of Patois serogroup viruses has not yet been reported and that ERV is the only virus within the Patois serogroup isolated from ticks, we recently conducted nearly complete genome sequencing in an attempt to gain further insight into the genetic relationship of ERV with other Patois serogroup viruses and members of family ( order). With the exception of ERV, our sequencing and phylogenetic studies revealed the close relationship of the Patois serogroup viruses to each other, forming a clear divergent clade from other members of the genus ( family). Notably, our analysis also revealed that ERV forms a monophyletic clade that is closely related to species of the genus ( family) in all the genome segments. In light of these findings, we believe that the taxonomic classification of ERV should be revised.

摘要

1980 年,从古巴圣斯皮里图斯省埃斯特罗雷亚尔采集的蜱中分离出了埃斯特罗雷亚尔病毒(ERV)。基于血清学方法对分离株的抗原特性进行了分析,发现它与 Abras 和 Zegla 病毒存在关系,因此该病毒在分类学上被归类为 Patois 血清群。鉴于尚未报道 Patois 血清群病毒的遗传特征,并且 ERV 是唯一从蜱中分离出的 Patois 血清群病毒,我们最近进行了近乎完整的基因组测序,试图进一步了解 ERV 与其他 Patois 血清群病毒和家族(目)成员之间的遗传关系。除了 ERV,我们的测序和系统发育研究表明,Patois 血清群病毒彼此之间密切相关,在所有基因组片段中形成一个与其他属(科)成员明显不同的分化枝。值得注意的是,我们的分析还表明,ERV 在所有基因组片段中都形成了一个与属(科)的物种密切相关的单系枝。鉴于这些发现,我们认为应该修订 ERV 的分类学分类。

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