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表型转换可以加速微生物进化。

Phenotypic Switching Can Speed up Microbial Evolution.

机构信息

School of Physics and Astronomy, The University of Edinburgh, Peter Guthrie Tait Road, Edinburgh, EH9 3FD, United Kingdom.

Centre for Synthetic and Systems Biology, The University of Edinburgh, Edinburgh, EH9 3FD, United Kingdom.

出版信息

Sci Rep. 2018 Jun 12;8(1):8941. doi: 10.1038/s41598-018-27095-9.

DOI:10.1038/s41598-018-27095-9
PMID:29895935
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5997679/
Abstract

Stochastic phenotype switching has been suggested to play a beneficial role in microbial populations by leading to the division of labour among cells, or ensuring that at least some of the population survives an unexpected change in environmental conditions. Here we use a computational model to investigate an alternative possible function of stochastic phenotype switching: as a way to adapt more quickly even in a static environment. We show that when a genetic mutation causes a population to become less fit, switching to an alternative phenotype with higher fitness (growth rate) may give the population enough time to develop compensatory mutations that increase the fitness again. The possibility of switching phenotypes can reduce the time to adaptation by orders of magnitude if the "fitness valley" caused by the deleterious mutation is deep enough. Our work has important implications for the emergence of antibiotic-resistant bacteria. In line with recent experimental findings, we hypothesise that switching to a slower growing - but less sensitive - phenotype helps bacteria to develop resistance by providing alternative, faster evolutionary routes to resistance.

摘要

随机表型转换被认为在微生物群体中发挥有益作用,通过导致细胞分工,或者确保至少部分群体在环境条件的意外变化中存活。在这里,我们使用计算模型来研究随机表型转换的另一种可能功能:作为一种即使在静态环境中也能更快适应的方式。我们表明,当遗传突变导致种群适应性降低时,转换为具有更高适应性(生长速度)的替代表型可能会给种群足够的时间来发展补偿性突变,从而再次提高适应性。如果由有害突变引起的“适应性低谷”足够深,那么表型转换的可能性可以将适应时间减少几个数量级。我们的工作对出现抗生素耐药菌具有重要意义。与最近的实验结果一致,我们假设向生长速度较慢但敏感性较低的表型转换有助于细菌通过提供更快的进化途径来获得耐药性,从而产生耐药性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5d2/5997679/f4b4cd32fa7f/41598_2018_27095_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5d2/5997679/6cc461d96bb6/41598_2018_27095_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5d2/5997679/7b9217c51d89/41598_2018_27095_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5d2/5997679/7bd6d10bf82e/41598_2018_27095_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5d2/5997679/4e9e2eff0f5b/41598_2018_27095_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5d2/5997679/d871f4e740ac/41598_2018_27095_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5d2/5997679/f4b4cd32fa7f/41598_2018_27095_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5d2/5997679/6cc461d96bb6/41598_2018_27095_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5d2/5997679/7b9217c51d89/41598_2018_27095_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5d2/5997679/7bd6d10bf82e/41598_2018_27095_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5d2/5997679/4e9e2eff0f5b/41598_2018_27095_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5d2/5997679/d871f4e740ac/41598_2018_27095_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5d2/5997679/f4b4cd32fa7f/41598_2018_27095_Fig6_HTML.jpg

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本文引用的文献

1
THE EVOLUTION OF MATERNAL CHARACTERS.母体特征的演变
Evolution. 1989 May;43(3):485-503. doi: 10.1111/j.1558-5646.1989.tb04247.x.
2
Epigenetic and Genetic Contributions to Adaptation in Chlamydomonas.《衣藻适应过程中的表观遗传与遗传贡献》
Mol Biol Evol. 2017 Sep 1;34(9):2285-2306. doi: 10.1093/molbev/msx166.
3
Antibiotic tolerance facilitates the evolution of resistance.抗生素耐药性促进了耐药性的进化。
利用基因条形码对癌症耐药性进化过程中的表型动态进行定量测量。
Nat Commun. 2025 Jun 20;16(1):5282. doi: 10.1038/s41467-025-59479-7.
4
A quantitative characterization of the heterogeneous response of glioblastoma U-87 MG cell line to temozolomide.胶质母细胞瘤U-87 MG细胞系对替莫唑胺异质性反应的定量表征。
Sci Rep. 2025 May 8;15(1):16017. doi: 10.1038/s41598-025-99426-6.
5
Stress adaptation under evolution influences survival and metabolic phenotypes of clinical and environmental strains of El-Tor.进化过程中的应激适应影响了埃尔托生物型临床菌株和环境菌株的生存及代谢表型。
Microbiol Spectr. 2025 Mar 4;13(3):e0121124. doi: 10.1128/spectrum.01211-24. Epub 2025 Feb 11.
6
Evolution of a bistable genetic system in fluctuating and nonfluctuating environments.在波动和非波动环境中双稳态遗传系统的演化。
Proc Natl Acad Sci U S A. 2024 Sep 3;121(36):e2322371121. doi: 10.1073/pnas.2322371121. Epub 2024 Aug 30.
7
Leveraging Cancer Phenotypic Plasticity for Novel Treatment Strategies.利用癌症表型可塑性制定新型治疗策略。
J Clin Med. 2024 Jun 5;13(11):3337. doi: 10.3390/jcm13113337.
8
Phylogenetic Analysis of Isolated from Australian Feedlot Cattle in Comparison to Pig Faecal and Poultry/Human Extraintestinal Isolates.与猪粪便及家禽/人类肠外分离株相比,澳大利亚饲养场牛分离株的系统发育分析
Antibiotics (Basel). 2023 May 11;12(5):895. doi: 10.3390/antibiotics12050895.
9
Adaptive Potential of Epigenetic Switching During Adaptation to Fluctuating Environments.适应波动环境时表观遗传开关的适应潜能。
Genome Biol Evol. 2022 May 3;14(5). doi: 10.1093/gbe/evac065.
10
Listeria monocytogenes Sublethal Injury and Viable-but-Nonculturable State Induced by Acidic Conditions and Disinfectants.酸性条件和消毒剂诱导单核细胞增生李斯特菌亚致死损伤和存活但非可培养状态。
Microbiol Spectr. 2021 Dec 22;9(3):e0137721. doi: 10.1128/Spectrum.01377-21. Epub 2021 Dec 15.
Science. 2017 Feb 24;355(6327):826-830. doi: 10.1126/science.aaj2191. Epub 2017 Feb 9.
4
Mechanisms of bacterial persistence during stress and antibiotic exposure.细菌在应激和抗生素暴露期间的持续存在机制。
Science. 2016 Dec 16;354(6318). doi: 10.1126/science.aaf4268.
5
Distinguishing between resistance, tolerance and persistence to antibiotic treatment.区分抗生素治疗的耐药性、耐受性和持久性。
Nat Rev Microbiol. 2016 Apr;14(5):320-30. doi: 10.1038/nrmicro.2016.34.
6
Non-adaptive plasticity potentiates rapid adaptive evolution of gene expression in nature.非适应性可塑性增强了自然界中基因表达的快速适应性进化。
Nature. 2015 Sep 17;525(7569):372-5. doi: 10.1038/nature15256. Epub 2015 Sep 2.
7
A functional perspective on phenotypic heterogeneity in microorganisms.从功能角度看微生物表型异质性。
Nat Rev Microbiol. 2015 Aug;13(8):497-508. doi: 10.1038/nrmicro3491. Epub 2015 Jul 6.
8
Epigenetic mutations can both help and hinder adaptive evolution.表观遗传突变既能促进也能阻碍适应性进化。
Mol Ecol. 2016 Apr;25(8):1856-68. doi: 10.1111/mec.13296. Epub 2015 Jul 30.
9
Delayed commitment to evolutionary fate in antibiotic resistance fitness landscapes.抗生素耐药适应性景观中进化命运的延迟承诺
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10
Emergence of antibiotic resistance from multinucleated bacterial filaments.多核细菌丝产生抗生素耐药性。
Proc Natl Acad Sci U S A. 2015 Jan 6;112(1):178-83. doi: 10.1073/pnas.1420702111. Epub 2014 Dec 9.