Machado André M, Felício Mónica, Fonseca Elza, da Fonseca Rute R, Castro L Filipe C
CIIMAR - Interdisciplinary Centre of Marine and Environmental Research, U. Porto - University of Porto, Porto, Portugal.
Portuguese Institute for the Sea and Atmosphere, I.P. (IPMA), Portugal.
Data Brief. 2018 Mar 13;18:276-284. doi: 10.1016/j.dib.2018.03.013. eCollection 2018 Jun.
Mackerels represent a valuable fishery worldwide. Their ample geographic distribution and capture levels make them an insightful model to address stock management strategies in the context of global changes. Yet, and despite recent impressive genome and transcriptome sequencing efforts from teleost species, available resources from the Scombridae family are comparatively scarce. Here, we generated the first high-quality assembly of the liver transcriptome of the Atlantic chub mackerel (). Through the use of RNA-Seq Illumina technology, 111,124,228 clean reads were obtained for the liver transcriptome. assembly resulted in 93,731 transcripts with an N50 of 1462 bp. This dataset provides an important insight into the context of fisheries management.
鲭鱼是全球重要的渔业资源。它们广泛的地理分布和捕捞量使其成为研究全球变化背景下种群管理策略的一个有价值的模型。然而，尽管近期硬骨鱼物种的基因组和转录组测序工作取得了令人瞩目的成果，但鲭科鱼类的可用资源相对较少。在此，我们首次对大西洋鲭（）肝脏转录组进行了高质量组装。通过使用Illumina RNA-Seq技术，获得了111,124,228条肝脏转录组的clean reads。组装得到了93,731个转录本，N50为1462 bp。该数据集为渔业管理提供了重要见解。
