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来自巴西半干旱地区的热带白腐担子菌(Sw.)克雷泽尔CCMB561的基因组序列草图。

Draft genome sequence of (Sw.) Kreisel CCMB561, a tropical white-rot Basidiomycota from the semiarid region of Brazil.

作者信息

Ferreira Dalila Souza Santos, Kato Rodrigo Bentes, Miranda Fábio Malcher, da Costa Pinheiro Kenny, Fonseca Paula Luize Camargos, Tomé Luiz Marcelo Ribeiro, Vaz Aline Bruna Martins, Badotti Fernanda, Ramos Rommel Thiago Jucá, Brenig Bertram, Azevedo Vasco Ariston de Carvalho, Benevides Raquel Guimarães, Góes-Neto Aristóteles

机构信息

State University of Feira de Santana, Departament of Biological Science, Feira de Santana, BA 44036-900, Brazil.

Federal University of Minas Gerais, Institute of Biological Sciences, Belo Horizonte, MG 31270-901, Brazil.

出版信息

Data Brief. 2018 Apr 25;18:1581-1587. doi: 10.1016/j.dib.2018.04.074. eCollection 2018 Jun.

Abstract

Herein, we present the draft genome of isolate CCMB561, a wood-decaying Basidiomycota commonly found in tropical semiarid climate. The genome assembly was 57.98 Mb in size with an L50 of 691. A total of 16,711 putative protein-encoding genes was predicted, including 590 genes coding for carbohydrate-active enzymes (CAZy), directly involved in the decomposition of lignocellulosic materials. This is the first genome of this species of high interest in bioenergy research. The draft genome of isolate CCMB561 will provide an important resource for future investigations in biofuel production, bioremediation and other green technologies.

摘要

在此,我们展示了分离株CCMB561的基因组草图,它是一种常见于热带半干旱气候中的腐朽木材担子菌。基因组组装大小为57.98 Mb,L50为691。共预测出16,711个推定的蛋白质编码基因,其中包括590个编码碳水化合物活性酶(CAZy)的基因,这些酶直接参与木质纤维素材料的分解。这是该物种在生物能源研究中备受关注的首个基因组。分离株CCMB561的基因组草图将为未来生物燃料生产、生物修复及其他绿色技术的研究提供重要资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0208/5998210/5507b395fbe8/gr1.jpg

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