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用于高通量斑马鱼胚胎排列的三维(3D)打印模板。

A 3-dimensional (3D)-printed Template for High Throughput Zebrafish Embryo Arraying.

作者信息

Yu Tianyu, Jiang Yue, Lin Sijie

机构信息

College of Environmental Science and Engineering, State Key Laboratory of Pollution Control and Resource Reuse, Tongji University; UNEP-Tongji Institute of Environment for Sustainable Development, Tongji University.

College of Environmental Science and Engineering, State Key Laboratory of Pollution Control and Resource Reuse, Tongji University.

出版信息

J Vis Exp. 2018 Jun 1(136):57892. doi: 10.3791/57892.

DOI:10.3791/57892
PMID:29912199
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6101470/
Abstract

The zebrafish is a globally recognized fresh water organism frequently used in developmental biology, environmental toxicology, and human disease related research fields. Thanks to its unique features, including large fecundity, embryo translucency, rapid and simultaneous development, etc., zebrafish embryos are often used for large scale toxicity assessment of chemicals and drug/compound screening. A typical screening procedure involves adult zebrafish spawning, embryos selection, and arraying the embryos into multi-well plates. From there, embryos are subjected to exposure and the toxicity of chemical, or the effectiveness of the drugs/compounds can be evaluated relatively quickly based on phenotypic observations. Among these processes, embryos arraying is one of the most time-consuming and labor-intensive steps that limits the throughput level. In this protocol, we present an innovative approach that makes use of a 3D-printed arraying template coupled with vacuum manipulation to speed up this laborious step. The protocol herein describes the overall design of the arraying template, a detailed experimental setup and step-by-step procedure, followed by representative results. When implemented, this approach should prove beneficial in a variety of research applications using zebrafish embryos as testing subjects.

摘要

斑马鱼是一种全球公认的淡水生物,常用于发育生物学、环境毒理学以及与人类疾病相关的研究领域。由于其具有独特的特征,包括繁殖力强、胚胎半透明、发育迅速且同步等,斑马鱼胚胎常被用于化学品的大规模毒性评估以及药物/化合物筛选。典型的筛选程序包括成年斑马鱼产卵、胚胎选择以及将胚胎排列到多孔板中。从那时起,胚胎接受暴露处理,基于表型观察可以相对快速地评估化学品的毒性或药物/化合物的有效性。在这些过程中,胚胎排列是最耗时且劳动强度最大的步骤之一,限制了通量水平。在本方案中,我们提出了一种创新方法,利用3D打印的排列模板结合真空操作来加速这一繁琐步骤。本文的方案描述了排列模板的总体设计、详细的实验设置和逐步操作步骤,随后展示了代表性结果。当实施时,这种方法在以斑马鱼胚胎作为测试对象的各种研究应用中应会被证明是有益的。

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本文引用的文献

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Automatic Categorization and Scoring of Solid, Part-Solid and Non-Solid Pulmonary Nodules in CT Images with Convolutional Neural Network.基于卷积神经网络的 CT 图像中实性、部分实性和非实性肺结节的自动分类和评分。
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Zebrafish larvae could help to personalize cancer treatments.斑马鱼幼体有助于实现癌症治疗的个性化。
Science. 2017 Aug 25;357(6353):745. doi: 10.1126/science.357.6353.745.
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Large-scale Scanning Transmission Electron Microscopy (Nanotomy) of Healthy and Injured Zebrafish Brain.健康和受伤斑马鱼大脑的大规模扫描透射电子显微镜(纳米断层成像)
J Vis Exp. 2016 May 25(111):53635. doi: 10.3791/53635.
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Understanding the transformation, speciation, and hazard potential of copper particles in a model septic tank system using zebrafish to monitor the effluent.利用斑马鱼监测污水排放,了解模型化粪池系统中铜颗粒的转化、形态形成及潜在危害。
ACS Nano. 2015 Feb 24;9(2):2038-48. doi: 10.1021/nn507216f. Epub 2015 Feb 2.
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Aspect ratio plays a role in the hazard potential of CeO2 nanoparticles in mouse lung and zebrafish gastrointestinal tract.纵横比在二氧化铈纳米颗粒对小鼠肺部和斑马鱼胃肠道的潜在危害中起作用。
ACS Nano. 2014 May 27;8(5):4450-64. doi: 10.1021/nn5012754. Epub 2014 Apr 16.
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Drug screening in Scn1a zebrafish mutant identifies clemizole as a potential Dravet syndrome treatment.Scn1a 斑马鱼突变体中的药物筛选鉴定 Clemizole 为潜在的 Dravet 综合征治疗药物。
Nat Commun. 2013;4:2410. doi: 10.1038/ncomms3410.
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The zebrafish reference genome sequence and its relationship to the human genome.斑马鱼参考基因组序列及其与人类基因组的关系。
Nature. 2013 Apr 25;496(7446):498-503. doi: 10.1038/nature12111. Epub 2013 Apr 17.
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Zebrafish: an in vivo model for nano EHS studies.斑马鱼:用于纳米 EHS 研究的活体模型。
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Automated phenotype recognition for zebrafish embryo based in vivo high throughput toxicity screening of engineered nano-materials.基于体内高通量毒性筛选的工程纳米材料对斑马鱼胚胎进行自动表型识别。
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Automated zebrafish chorion removal and single embryo placement: optimizing throughput of zebrafish developmental toxicity screens.斑马鱼卵膜自动去除与单个胚胎放置:优化斑马鱼发育毒性筛选的通量
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