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比较研究表明,圆口铜腹鱼(水榕科,腹足纲)在免疫学方面具有共享和独特的特征。

Comparative immunological study of the snail Physella acuta (Hygrophila, Pulmonata) reveals shared and unique aspects of gastropod immunobiology.

机构信息

Center for Evolutionary and Theoretical Immunology, Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA.

Center for Evolutionary and Theoretical Immunology, Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA.

出版信息

Mol Immunol. 2018 Sep;101:108-119. doi: 10.1016/j.molimm.2018.05.029. Epub 2018 Jun 17.

Abstract

The freshwater snail Physella acuta was selected to expand the perspective of comparative snail immunology. Analysis of Physella acuta, belonging to the Physidae, taxonomic sister family to Planorbidae, affords family-level comparison of immune features characterized from Biomphalaria glabrata, the model snail often used to interpret general gastropod immunity. To capture constitutive and induced immune sequences, transcriptomes of an individual Physella acuta snail, 12 h post injection with bacteria (Gram -/+) and one sham-exposed snail were recorded with 454 pyrosequencing. Assembly yielded a combined reference transcriptome containing 24,288 transcripts. Additionally, genomic Illumina reads were obtained (∼15-fold coverage). Recovery of transcripts for two macin-like antimicrobial peptides (AMPs), 12 aplysianins, four LBP/BPIs and three physalysins indicated that Physella acuta shares a similar organization of antimicrobial defenses with Biomphalaria glabrata, contrasting a modest AMP arsenal with a diverse set of antimicrobial proteins. The lack of predicted transmembrane domains in all seven Physella acuta PGRP transcripts supports the notion that gastropods do not employ cell-bound PGRP receptors, different from ecdysozoan invertebrates yet similar to mammals (vertebrate deuterostomes). The well-documented sequence diversification by Biomphalaria glabrata FREPs (immune lectins comprising immunoglobulin superfamily domains and fibrinogen domains), resulting from somatic mutations of a large FREP gene family is hypothesized to be unique to Planorbidae; Physella acuta revealed just two bonafide FREP genes and these were not diversified. Furthermore, the flatworm parasite Echinostoma paraensei, confirmed here to infect both snail species, did not evoke from Physella acuta the abundant expression of FREP proteins at 2, 4 and 8 days post exposure that was previously observed from Biomphalaria glabrata. The Physella acuta reference transcriptome also revealed 24 unique transcripts encoding proteins consisting of a single fibrinogen-related domain (FReDs), with a short N-terminal sequence encoding either a signal peptide, transmembrane domain or no predicted features. The Physella acuta FReDs are candidate immune genes based on implication of similar sequences in immunity of bivalve molluscs. Overall, comparative analysis of snails of sister families elucidated the potential for taxon-specific immune features and investigation of strategically selected species will provide a more comprehensive view of gastropod immunity.

摘要

选择淡水田螺 Physella acuta 来扩展比较蜗牛免疫学的视角。分析属于Physidae 的 Physella acuta,与 Planorbidae 分类上的姐妹家族,提供了从经常用于解释一般腹足动物免疫的模式蜗牛 Biomphalaria glabrata 中得出的免疫特征的家族级比较。为了捕获组成型和诱导型免疫序列,对一只 Physella acuta 蜗牛在注射细菌(革兰氏阴性/阳性)后 12 小时和一只假暴露的蜗牛进行了转录组记录,使用 454 焦磷酸测序进行记录。组装产生了一个包含 24,288 个转录本的组合参考转录组。此外,还获得了基因组 Illumina 读数(约 15 倍覆盖度)。两种类似麦卡林的抗菌肽 (AMP)、12 种 aplysianins、4 种 LBP/BPIs 和 3 种 physalysins 的转录本的恢复表明,Physella acuta 与 Biomphalaria glabrata 具有相似的抗菌防御组织,与多样化的抗菌蛋白形成鲜明对比的是适度的 AMP 武器库。在所有 7 个 Physella acuta PGRP 转录本中都没有预测到跨膜结构域,这支持了这样一种观点,即腹足动物不使用细胞结合的 PGRP 受体,这与蜕皮动物无脊椎动物不同,但与哺乳动物(脊椎动物后口动物)相似。在生物多样性丰富的淡水螺类生物中,Biomphalaria glabrata FREPs(由免疫球蛋白超家族结构域和纤维蛋白原结构域组成的免疫凝集素)通过大量 FREP 基因家族的体细胞突变产生的序列多样化被认为是 Planorbidae 所特有的;Physella acuta 只揭示了两个真正的 FREP 基因,而且这些基因没有多样化。此外,扁形虫寄生虫 Echinostoma paraensei 在这里被证实感染了这两个蜗牛物种,但与以前在 Biomphalaria glabrata 中观察到的情况不同,它并没有引起 Physella acuta 在暴露后 2、4 和 8 天大量表达 FREP 蛋白。Physella acuta 参考转录组还揭示了 24 个独特的转录本,编码由单个纤维蛋白原相关结构域 (FReD) 组成的蛋白质,其 N 端序列较短,编码信号肽、跨膜结构域或无预测特征。基于类似序列在双壳类软体动物免疫中的作用,Physella acuta 的 FReDs 是候选免疫基因。总体而言,对姐妹家族蜗牛的比较分析阐明了特定于分类群的免疫特征的潜力,对有策略地选择的物种进行研究将提供更全面的腹足动物免疫视图。

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