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无标记定量蛋白质组学分析南方水稻黑条矮缩病毒感染水稻中胞嘧啶肽霉素的反应。

Label-free quantitative proteomics analysis of Cytosinpeptidemycin responses in southern rice black-streaked dwarf virus-infected rice.

机构信息

State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Guiyang 550025, PR China.

State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Guiyang 550025, PR China.

出版信息

Pestic Biochem Physiol. 2018 May;147:20-26. doi: 10.1016/j.pestbp.2017.06.005. Epub 2017 Jun 9.

DOI:10.1016/j.pestbp.2017.06.005
PMID:29933987
Abstract

Southern rice black-streaked dwarf virus (SRBSDV), a genus Fijivirus of the family Reoviridae, could result in the significant crop losses because being short of an effective controlling measures. Cytosinpeptidemycin, a microbial pesticides developed by China, displayed a wide antiviral activity against many plant viruses. However, its underlying mechanism remains unclear. In this study, a total of 2321 proteins were identified using label-free proteomics technology. Compared with the treatment of SRBSDV-infected rice, 84 and 207 proteins were detected to be up-regulated and only presented in treatment group of SDBSDV-infected rice pre-treated by Cytosinpeptidemycin, which were partially enriched to stress and defense response, such as pathogenesis-related protein 5 (PR-5), pathogenesis-related protein 10 (PR-10) and heat shock protein (Hsp protein). Meanwhile, the real-time quantitative PCR (RT-qPCR) showed that Cytosinpeptidemycin could also up-regulate some resistance genes, and these results indicated a similar trends with the data of the label-free proteomics. Moreover, Cytosinpeptidemycin could enhance the defense enzymatic activities of peroxidase (POD), superoxide dismutase (SOD), and catalase (CAT). These data offer a more comprehensive view about the response of SRBSDV-infected rice triggered by Cytosinpeptidemycin in the level of the proteome, mRNA and enzymatic activity.

摘要

南方水稻黑条矮缩病毒(SRBSDV)是呼肠孤病毒科斐济病毒属的一种病毒,由于缺乏有效的控制措施,它会导致严重的作物损失。衣霉素是中国开发的一种微生物农药,对许多植物病毒表现出广泛的抗病毒活性。然而,其潜在的机制尚不清楚。在这项研究中,使用无标记蛋白质组学技术共鉴定了 2321 种蛋白质。与感染 SRBSDV 的水稻处理相比,在感染 SDBSDV 的水稻经衣霉素预处理的处理组中检测到 84 种和 207 种蛋白质上调,且仅在该处理组中表达,这些蛋白质部分富集于应激和防御反应,如病程相关蛋白 5(PR-5)、病程相关蛋白 10(PR-10)和热休克蛋白(Hsp 蛋白)。同时,实时定量 PCR(RT-qPCR)显示衣霉素也能上调一些抗性基因,这些结果与无标记蛋白质组学的数据有相似的趋势。此外,衣霉素能增强过氧化物酶(POD)、超氧化物歧化酶(SOD)和过氧化氢酶(CAT)的防御酶活性。这些数据从蛋白质组、mRNA 和酶活性水平上提供了更全面的视角,说明了衣霉素对感染 SRBSDV 的水稻的触发反应。

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