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小型猪中基因的转录本变体和表达谱分析

Transcript variants and expression profiles analysis of gene in minipigs.

作者信息

Guo Weiwei, Ren Lili, Chen Lei, Ning Yu, Zhao Lidong, Yang Shiming

机构信息

Department of Otolaryngology-Head & Neck Surgery, Institute of Otolaryngology of PLA, Chinese PLA General Hospital, Beijing 100853, China.

State Key Laboratory for Agro-biotechnology, China Agricultural University, Beijing, China.

出版信息

J Otol. 2015 Jun;10(2):83-86. doi: 10.1016/j.joto.2015.09.005. Epub 2015 Sep 30.

DOI:10.1016/j.joto.2015.09.005
PMID:29937787
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6002570/
Abstract

OBJECT

To identify transcript variants and expression patterns of porcine .

MATERIALS AND METHODS

A pairwise BLAST search at NCBI database was performed to deduce the structure of porcine gene. Subsequently, 5' RACE and fluorescent quantitative RT-PCR were used to analyze the expression pattern of porcine in different tissues.

RESULTS

Four transcript variants of porcine , MITF-A, MITF-H, MITF-M and MITF-SUS were identified, all sharing high homology with those in humans, except Mitf-SUS.

CONCLUSION

The sequence of porcine appear highly homologous to human . However, only 4 transcript variants of porcine were identified in these minipigs, less than the 9 transcript variants in human .

摘要

目的

鉴定猪的转录本变体和表达模式。

材料与方法

在NCBI数据库中进行成对BLAST搜索以推导猪基因的结构。随后,采用5' RACE和荧光定量RT-PCR分析猪在不同组织中的表达模式。

结果

鉴定出猪的四种转录本变体,即MITF-A、MITF-H、MITF-M和MITF-SUS,除Mitf-SUS外,其余均与人类的高度同源。

结论

猪的序列与人的序列高度同源。然而,在这些小型猪中仅鉴定出4种猪的转录本变体,少于人类的9种转录本变体。

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The morphology and electrophysiology of the cochlea of the miniature pig.小型猪耳蜗的形态学与电生理学
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Genomic analysis of the Microphthalmia locus and identification of the MITF-J/Mitf-J isoform.小眼畸形基因座的基因组分析及MITF-J/Mitf-J亚型的鉴定。
Gene. 2005 Feb 28;347(1):73-82. doi: 10.1016/j.gene.2004.12.002.
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Transcription factors in melanocyte development: distinct roles for Pax-3 and Mitf.黑素细胞发育中的转录因子:Pax-3和Mitf的不同作用。
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Structural organization of the human microphthalmia-associated transcription factor gene containing four alternative promoters.包含四个可变启动子的人类小眼畸形相关转录因子基因的结构组织
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Molecular cloning of cDNA encoding a novel microphthalmia-associated transcription factor isoform with a distinct amino-terminus.编码一种具有独特氨基末端的新型小眼相关转录因子异构体的cDNA的分子克隆。
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