Jennings Benjamin C, Lawton Alexis J, Rizk Zeinab, Fierke Carol A
Department of Chemistry , University of Michigan , Ann Arbor , Michigan 48109 , United States.
Biochemistry. 2018 Jul 24;57(29):4289-4298. doi: 10.1021/acs.biochem.8b00567. Epub 2018 Jul 10.
Protein prenylation involves the attachment of a hydrophobic isoprenoid moiety to the C-terminus of proteins. Several small GTPases, including members of the Ras and Rho subfamilies, require prenylation for their normal and pathological functions. Recent work has suggested that SmgGDS proteins regulate the prenylation of small GTPases in vivo. Using RhoA as a representative small GTPase, we directly test this hypothesis using biochemical assays and present a mechanism describing the mode of prenylation regulation. SmgGDS-607 completely inhibits RhoA prenylation catalyzed by protein geranylgeranyltransferase I (GGTase-I) in an in vitro radiolabel incorporation assay. SmgGDS-607 inhibits prenylation by binding to and blocking access to the C-terminal tail of the small GTPase (substrate sequestration mechanism) rather than via inhibition of the prenyltransferase activity. The reactivity of GGTase-I with RhoA is unaffected by addition of nucleotides. In contrast, the affinity of SmgGDS-607 for RhoA varies with the nucleotide bound to RhoA; SmgGDS-607 has a higher affinity for RhoA-GDP compared to RhoA-GTP. Consequently, the prenylation blocking function of SmgGDS-607 is regulated by the bound nucleotide. This work provides mechanistic insight into a novel pathway for the regulation of small GTPase protein prenylation by SmgGDS-607 and demonstrates that peptides are a good mimic for full-length proteins when measuring GGTase-I activity.
蛋白质异戊二烯化涉及将一个疏水的类异戊二烯部分连接到蛋白质的C末端。几种小GTP酶,包括Ras和Rho亚家族的成员,其正常和病理功能都需要异戊二烯化。最近的研究表明,SmgGDS蛋白在体内调节小GTP酶的异戊二烯化。我们以RhoA作为代表性的小GTP酶,通过生化分析直接验证这一假设,并提出了一种描述异戊二烯化调节模式的机制。在体外放射性标记掺入分析中,SmgGDS-607完全抑制了由蛋白质香叶基香叶基转移酶I(GGTase-I)催化的RhoA异戊二烯化。SmgGDS-607通过与小GTP酶的C末端尾巴结合并阻止其接近(底物隔离机制)来抑制异戊二烯化,而不是通过抑制异戊二烯基转移酶的活性。GGTase-I与RhoA的反应性不受核苷酸添加的影响。相反,SmgGDS-607对RhoA的亲和力随与RhoA结合的核苷酸而变化;与RhoA-GTP相比,SmgGDS-607对RhoA-GDP具有更高的亲和力。因此,SmgGDS-607的异戊二烯化阻断功能受结合核苷酸的调节。这项工作为SmgGDS-607调节小GTP酶蛋白异戊二烯化的新途径提供了机制上的见解,并证明在测量GGTase-I活性时,肽是全长蛋白很好的模拟物。