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应激诱导的枯草芽孢杆菌中供体细胞依赖的高效细胞间自然转化。

Stress-Induced, Highly Efficient, Donor Cell-Dependent Cell-to-Cell Natural Transformation in Bacillus subtilis.

机构信息

State Key Laboratory of Virology, College of Life Sciences, Wuhan University, Wuhan, Hubei, China.

Department of Biological Science and Technology, Changzhi College, Changzhi, Shanxi, China.

出版信息

J Bacteriol. 2018 Aug 10;200(17). doi: 10.1128/JB.00267-18. Print 2018 Sep 1.

Abstract

Horizontal gene transfer (HGT) is a driving force for bacterial evolution that occurs via conjugation, transduction, and transformation. Whereas conjugation and transduction depend on nonbacterial vehicles, transformation is considered a naturally occurring process in which naked DNA molecules are taken up by a competent recipient cell. Here, we report that HGT occurred between two strains cocultured on a minimum medium agar plate for 10 h. This process was almost completely resistant to DNase treatment and appeared to require close proximity between cells. The deletion of in the recipient completely abolished gene transfer, indicating that the process involved transformation. This process was also highly efficient, reaching 1.75 × 10 transformants/μg DNA compared to 5.3 × 10 and 1.86 × 10 transformants/μg DNA for DNA-to-cell transformation by the same agar method and the standard two-step procedure, respectively. Interestingly, when three distantly localized chromosomal markers were selected simultaneously, the efficiency of cell-to-cell transformation still reached 6.26 × 10 transformants/μg DNA, whereas no transformants were obtained when free DNA was used as the donor. Stresses, such as starvation and exposure to antibiotics, further enhanced transformation efficiency by affecting the donor cells, suggesting that stress served as an important signal for promoting this type of HGT. Taken together, our results defined a bona fide process of cell-to-cell natural transformation (CTCNT) in and related species. This finding reveals the previously unrecognized role of donor cells in bacterial natural transformation and improves our understanding of how HGT drives bacterial evolution at a mechanistic level. Because DNA is easily prepared, studies of bacterial natural genetic transformation traditionally focus on recipient cells. However, such laboratory artifacts cannot explain how this process occurs in nature. In most cases, competence is only transient and involves approximately 20 to 50 genes, and it is unreasonable for bacteria to spend so many genetic resources on unpredictable and uncertain environmental DNA. Here, we characterized a donor cell-dependent CTCNT process in and related species that was almost completely resistant to DNase treatment and was more efficient than classical natural transformation using naked DNA as a donor, i.e., DNA-to-cell transformation, suggesting that DNA donor cells were also important in the transformation process in natural environments.

摘要

水平基因转移(HGT)是细菌进化的驱动力,通过接合、转导和转化发生。虽然接合和转导依赖于非细菌载体,但转化被认为是一种自然发生的过程,其中裸露的 DNA 分子被感受态受体细胞摄取。在这里,我们报告说,在最小培养基琼脂平板上共培养 10 小时后,两种 菌株之间发生了 HGT。这个过程几乎完全抵抗 DNA 酶处理,似乎需要细胞之间的紧密接近。受体中 的缺失完全消除了基因转移,表明该过程涉及转化。这个过程也非常高效,与相同琼脂方法和标准两步程序的 DNA 到细胞转化相比,达到了 1.75×10 个转化体/μg DNA,分别为 5.3×10 和 1.86×10 个转化体/μg DNA。有趣的是,当同时选择三个远距离定位的染色体标记时,细胞间转化的效率仍然达到 6.26×10 个转化体/μg DNA,而当使用游离 DNA 作为供体时,则没有获得转化体。饥饿和暴露于抗生素等应激会通过影响供体细胞进一步增强转化效率,这表明应激是促进这种类型 HGT 的重要信号。总之,我们的结果定义了 和相关物种中真正的细胞间自然转化(CTCNT)过程。这一发现揭示了供体细胞在细菌自然转化中的先前未被认识的作用,并提高了我们对 HGT 如何在机制水平上推动细菌进化的理解。由于 DNA 很容易制备,因此细菌自然遗传转化的研究传统上侧重于受体细胞。然而,这种实验室人工制品不能解释这个过程在自然界中是如何发生的。在大多数情况下,感受态是短暂的,涉及大约 20 到 50 个基因,细菌花费如此多的遗传资源在不可预测和不确定的环境 DNA 上是不合理的。在这里,我们描述了 和相关物种中一种依赖供体细胞的 CTCNT 过程,该过程几乎完全抵抗 DNA 酶处理,并且比使用裸露 DNA 作为供体的经典自然转化(即 DNA 到细胞转化)更有效,这表明 DNA 供体细胞在自然环境中的转化过程中也很重要。

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