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从堆肥中分离出的具有人参皂苷转化活性的新种人参皂苷转化寡养杆菌,以及将家养假鞘氨醇杆菌重新分类为家养寡养杆菌,新组合。

Olivibacter ginsenosidimutans sp nov., with ginsenoside converting activity isolated from compost, and reclassification of Pseudosphingobacterium domesticum as Olivibacter domesticus comb. nov.

作者信息

Siddiqi Muhammad Zubair, Liu Qingmei, Lee Soon Youl, Choi Kang Duk, Im Wan-Taek

机构信息

1​Department of Biotechnology, Hankyoung National University, 327 Chungang-no Anseong-si, Kyonggi-do 17579, Republic of Korea.

2​Sellusone Co., Ltd., 327 Chungang-no Anseong-si, Kyonggi-do 17579, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2018 Aug;68(8):2509-2514. doi: 10.1099/ijsem.0.002819. Epub 2018 Jun 26.

DOI:10.1099/ijsem.0.002819
PMID:29944109
Abstract

A Gram-stain-negative, aerobic and rod-shaped, bacterium designated as strain BS18, was isolated from compost and subjected to a polyphasic taxonomic analysis. On the basis of the results of 16S rRNA gene sequence analysis, BS18 represents a member of the genus Olivibacter of the family Sphingobacteriaceaeand is most closely related to Olivibacter oleidegradansTBF2/20.2 (93.7 %), Olivibacter jilunii 14-2A (93.6 %), Olivibacter ginsengisoli Gsoil 060 (93.6 %), Pseudosphingobacterium domesticumDC186 (93.0 %) and shared ≤93.1 % sequence similarity with the other members of the genus Olivibacter. BS18 contained MK-7 as the predominant quinone, iso-C15 : 0, iso-C17 : 0 3-OH and summed feature 4 (iso-C15 : 0 2-OH and/or C16 : 1ω7c), as the major fatty acids and phosphatidylethanolamine (PE) as main polar lipid. BS18 could be distinguished from the other members of the genus Olivibacter by a number of chemotaxonomic and phenotypic characteristics. On the basis of the results of polyphasic taxonomic analysis, BS18 represents a novel species within the genus, for which the name Olivibacter ginsenosidimutans sp. nov. is proposed. The type strain of Olivibacter ginsenosidimutans is BS18 (=KACC 16612=JCM 18200). It is also proposed to transfer Pseudosphingobacterium domesticumto the genus Olivibacter, as Olivibacter domesticus comb. nov. (type strain DC186=CCUG 54353=LMG 23837).

摘要

从堆肥中分离出一株革兰氏染色阴性、需氧的杆状细菌,命名为BS18菌株,并对其进行了多相分类分析。基于16S rRNA基因序列分析结果,BS18代表鞘氨醇杆菌科Olivibacter属的一个成员,与降解油酸Olivibacter oleidegradans TBF2/20.2(93.7%)、纪氏Olivibacter jilunii 14-2A(93.6%)、人参土壤Olivibacter ginsengisoli Gsoil 060(93.6%)、家栖假鞘氨醇杆菌Pseudosphingobacterium domesticum DC186(93.0%)关系最为密切,与Olivibacter属的其他成员序列相似性≤93.1%。BS18以MK-7作为主要醌类,以异C15:0、异C17:0 3-OH和特征性总和4(异C15:0 2-OH和/或C16:1ω7c)作为主要脂肪酸,以磷脂酰乙醇胺(PE)作为主要极性脂质。BS18可通过一些化学分类和表型特征与Olivibacter属的其他成员区分开来。基于多相分类分析结果,BS18代表该属内的一个新物种,为此提出名为人参皂苷突变Olivibacter ginsenosidimutans sp. nov.的名称。人参皂苷突变Olivibacter ginsenosidimutans的模式菌株为BS18(=KACC 16612=JCM 182)。还建议将家栖假鞘氨醇杆菌转移到Olivibacter属,命名为家栖Olivibacter domesticus comb. nov.(模式菌株DC186=CCUG 54353=LMG 23837)。

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