Siddiqi Muhammad Zubair, Aslam Zubair, Im Wan-Taek
Department of Biotechnology, Hankyong National University, 327 Chungang-no Anseong-si, Kyonggi-do 456-749, Republic of Korea.
Center for Genetic Information, Graduate School of Bio and Information Technology, Hankyong National University, 327 Chungang-no Anseong-si, Kyonggi-do 456-749, Republic of Korea.
Int J Syst Evol Microbiol. 2017 Apr;67(4):1005-1010. doi: 10.1099/ijsem.0.001720. Epub 2017 May 5.
A Gram-reaction-negative, catalase- and oxidase-positive, aerobic, non-motile, light yellow and rod-shaped bacterium (designated Gsoil 809T) isolated from soil of ginseng field, was characterized by a polyphasic approach to clarify its taxonomic position. Strain Gsoil 809T was observed to grow optimally at 30 °C and at pH 7.0 on nutrient agar medium. Strain Gsoil 809T possessed β-glucosidase activity, which was responsible for its ability to transform protopanaxatriol-type ginsenoside Rg1 to ginsenoside Rh1. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain Gsoil 809T belongs to the genus Arachidicoccus of the family Chitinophagaceae and was most closely related to Arachidicoccusrhizosphaerae Vu-144T (98.1 % 16S rRNA gene sequence similarity). The DNA G+C content was 39.4 mol%. The DNA-DNA hybridization value between strain Gsoil 809T and A.rhizosphaerae Vu-144T was 41.27±1.03 %. The major polar lipids were phosphatidylethanolamine and an unknown polar lipid. The predominant quinone was MK-7. The major fatty acids were iso-C15 : 0, iso-C15 : 1 G, iso-C17 : 0 3-OH and summed feature 3, which supported the affiliation of Gsoil 809T to the genus Arachidicoccus. Strain Gsoil 809T contained homospermidineas the major polyamine. Moreover, the physiological and biochemical test results and low DNA-DNA relatedness value allowed the phenotypic and genotypic differentiation of strain Gsoil 809T from recognized species of the genus Arachidicoccus. Therefore, strain Gsoil 809T represents a novel species of the genus Arachidicoccus, for which the name Arachidicoccus ginsenosidivorans sp. nov. is proposed. The type strain is Gsoil 809T (=KCTC 22820T=JCM 30984T).
从人参田土壤中分离出一株革兰氏阴性、过氧化氢酶和氧化酶阳性、需氧、不运动、浅黄色杆状细菌(命名为Gsoil 809T),采用多相分类法对其进行特征分析以明确其分类地位。观察到菌株Gsoil 809T在营养琼脂培养基上于30 °C和pH 7.0条件下生长最佳。菌株Gsoil 809T具有β-葡萄糖苷酶活性,这使其具备将原人参三醇型人参皂苷Rg1转化为人参皂苷Rh1的能力。基于16S rRNA基因序列的系统发育分析表明,菌株Gsoil 809T属于几丁质噬纤维菌科的花生球菌属,与花生根际球菌Vu-144T关系最为密切(16S rRNA基因序列相似性为98.1 %)。DNA G+C含量为39.4 mol%。菌株Gsoil 809T与花生根际球菌Vu-144T之间的DNA-DNA杂交值为41.27±1.03 %。主要极性脂为磷脂酰乙醇胺和一种未知极性脂。主要醌为MK-7。主要脂肪酸为异-C15 : 0、异-C15 : 1 G、异-C17 : 0 3-OH和特征性总和3,这支持了Gsoil 809T属于花生球菌属。菌株Gsoil 809T含有高亚精胺作为主要多胺。此外,生理生化测试结果和低DNA-DNA相关性值使得菌株Gsoil 809T能够与花生球菌属已确认的物种在表型和基因型上区分开来。因此,菌株Gsoil 809T代表花生球菌属的一个新物种,为此提出名为人参皂苷转化花生球菌(Arachidicoccus ginsenosidivorans sp. nov.)的名称。模式菌株为Gsoil 809T(=KCTC 22820T=JCM 30984T)。