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本文引用的文献

1
NMR analysis of substrate binding to a two-domain chitinase: Comparison between soluble and insoluble chitins.底物与双结构域几丁质酶结合的核磁共振分析:可溶性几丁质与不溶性几丁质的比较。
Carbohydr Res. 2018 Mar 22;458-459:52-59. doi: 10.1016/j.carres.2018.02.004. Epub 2018 Feb 8.
2
Distinct roles of N- and O-glycans in cellulase activity and stability.N- 和 O-聚糖在纤维素酶活性和稳定性中的作用不同。
Proc Natl Acad Sci U S A. 2017 Dec 26;114(52):13667-13672. doi: 10.1073/pnas.1714249114. Epub 2017 Dec 11.
3
Structural determinants of bacterial lytic polysaccharide monooxygenase functionality.细菌溶菌多糖单加氧酶功能的结构决定因素。
J Biol Chem. 2018 Jan 26;293(4):1397-1412. doi: 10.1074/jbc.M117.817130. Epub 2017 Dec 8.
4
Oxidative cleavage of polysaccharides by monocopper enzymes depends on HO.单铜酶通过 HO 实现多糖的氧化裂解。
Nat Chem Biol. 2017 Oct;13(10):1123-1128. doi: 10.1038/nchembio.2470. Epub 2017 Aug 28.
5
Chemical shift assignments for the apo-form of the catalytic domain, the linker region, and the carbohydrate-binding domain of the cellulose-active lytic polysaccharide monooxygenase ScLPMO10C.纤维素活性溶菌多糖单加氧酶ScLPMO10C的催化结构域、连接区和碳水化合物结合结构域的脱辅基形式的化学位移归属。
Biomol NMR Assign. 2017 Oct;11(2):257-264. doi: 10.1007/s12104-017-9759-2. Epub 2017 Aug 18.
6
Probing the Complex Architecture of Multimodular Carbohydrate-Active Enzymes Using a Combination of Small Angle X-Ray Scattering and X-Ray Crystallography.结合小角X射线散射和X射线晶体学探究多模块碳水化合物活性酶的复杂结构
Methods Mol Biol. 2017;1588:239-253. doi: 10.1007/978-1-4939-6899-2_19.
7
A novel expression system for lytic polysaccharide monooxygenases.一种用于裂解多糖单加氧酶的新型表达系统。
Carbohydr Res. 2017 Aug 7;448:212-219. doi: 10.1016/j.carres.2017.02.003. Epub 2017 Feb 14.
8
Interactions of a fungal lytic polysaccharide monooxygenase with β-glucan substrates and cellobiose dehydrogenase.一种真菌裂解多糖单加氧酶与β-葡聚糖底物及纤维二糖脱氢酶的相互作用
Proc Natl Acad Sci U S A. 2016 May 24;113(21):5922-7. doi: 10.1073/pnas.1602566113. Epub 2016 May 5.
9
Discovery and industrial applications of lytic polysaccharide mono-oxygenases.裂解多糖单加氧酶的发现与工业应用
Biochem Soc Trans. 2016 Feb;44(1):143-9. doi: 10.1042/BST20150204.
10
Structural and Functional Analysis of a Lytic Polysaccharide Monooxygenase Important for Efficient Utilization of Chitin in Cellvibrio japonicus.对日本纤维弧菌中高效利用几丁质至关重要的一种裂解多糖单加氧酶的结构与功能分析
J Biol Chem. 2016 Apr 1;291(14):7300-12. doi: 10.1074/jbc.M115.700161. Epub 2016 Feb 8.

一个模块化的溶菌多糖单加氧酶的碳水化合物结合模块和连接子促进局部纤维素氧化。

The carbohydrate-binding module and linker of a modular lytic polysaccharide monooxygenase promote localized cellulose oxidation.

机构信息

From NOBIPOL, Department of Biotechnology and Food Science, NTNU Norwegian University of Science and Technology, Sem Sælands vei 6/8, N-7491 Trondheim, Norway.

the Faculty of Chemistry, Biotechnology and Food Science, NMBU Norwegian University of Life Sciences, N-1432 Ås, Norway, and.

出版信息

J Biol Chem. 2018 Aug 24;293(34):13006-13015. doi: 10.1074/jbc.RA118.004269. Epub 2018 Jul 2.

DOI:10.1074/jbc.RA118.004269
PMID:29967065
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6109919/
Abstract

Lytic polysaccharide monooxygenases (LPMOs) are copper-dependent enzymes that catalyze the oxidative cleavage of polysaccharides such as cellulose and chitin, a feature that makes them key tools in industrial biomass conversion processes. The catalytic domains of a considerable fraction of LPMOs and other carbohydrate-active enzymes (CAZymes) are tethered to carbohydrate-binding modules (CBMs) by flexible linkers. These linkers preclude X-ray crystallographic studies, and the functional implications of these modular assemblies remain partly unknown. Here, we used NMR spectroscopy to characterize structural and dynamic features of full-length modular LPMO10C from We observed that the linker is disordered and extended, creating distance between the CBM and the catalytic domain and allowing these domains to move independently of each other. Functional studies with cellulose nanofibrils revealed that most of the substrate-binding affinity of full-length LPMO10C resides in the CBM. Comparison of the catalytic performance of full-length LPMO10C and its isolated catalytic domain revealed that the CBM is beneficial for LPMO activity at lower substrate concentrations and promotes localized and repeated oxidation of the substrate. Taken together, these results provide a mechanistic basis for understanding the interplay between catalytic domains linked to CBMs in LPMOs and CAZymes in general.

摘要

溶细胞多糖单加氧酶(LPMOs)是一类依赖铜的酶,能够催化多糖(如纤维素和几丁质)的氧化断裂,这一特性使它们成为工业生物质转化过程中的关键工具。相当一部分 LPMO 和其他碳水化合物活性酶(CAZymes)的催化结构域通过柔性接头与碳水化合物结合模块(CBMs)连接。这些接头阻碍了 X 射线晶体学研究,这些模块化组装的功能意义在一定程度上仍然未知。在这里,我们使用 NMR 光谱学来表征全长模块化 LPMO10C 的结构和动态特征。我们观察到接头是无定形和伸展的,在 CBM 和催化结构域之间创造了距离,使这些结构域能够彼此独立地移动。使用纤维素纳米纤维进行的功能研究表明,全长 LPMO10C 的大部分底物结合亲和力位于 CBM 中。全长 LPMO10C 及其分离的催化结构域的催化性能比较表明,CBM 有利于较低底物浓度下的 LPMO 活性,并促进底物的局部和重复氧化。总之,这些结果为理解 LPMO 和 CAZymes 中与 CBM 连接的催化结构域之间的相互作用提供了一个机制基础。