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一种用于测量 DNA 复制速率的活细胞成像方法。

A Live-Cell Imaging Approach for Measuring DNA Replication Rates.

机构信息

Department of Life Sciences and the National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Be'er Sheva 8410501, Israel.

Department of Life Sciences and the National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Be'er Sheva 8410501, Israel.

出版信息

Cell Rep. 2018 Jul 3;24(1):252-258. doi: 10.1016/j.celrep.2018.06.018.

DOI:10.1016/j.celrep.2018.06.018
PMID:29972785
Abstract

We describe a simple and direct approach to measure the progression of single DNA replication forks in living cells by monitoring two fluorescently labeled loci downstream of an origin of replication. We employ this approach to investigate the roles of several leading and lagging strand factors in overall replisome function and show that fork progression is strongly dependent on proper maturation of Okazaki fragments. We also demonstrate how related cellular phenotypes, such as cell-cycle progression and the dynamics of sister chromatid cohesion, may be simultaneously monitored and correlated to DNA replication at the single-cell level.

摘要

我们描述了一种简单直接的方法,通过监测复制起始点下游的两个荧光标记位点,来测量活细胞中单 DNA 复制叉的进展。我们利用这种方法研究了几个前导链和滞后链因子在整体复制体功能中的作用,并表明叉的进展强烈依赖于 Okazaki 片段的适当成熟。我们还展示了如何同时监测相关的细胞表型,如细胞周期进程和姐妹染色单体凝聚的动态,并将其与单细胞水平的 DNA 复制相关联。

相似文献

1
A Live-Cell Imaging Approach for Measuring DNA Replication Rates.一种用于测量 DNA 复制速率的活细胞成像方法。
Cell Rep. 2018 Jul 3;24(1):252-258. doi: 10.1016/j.celrep.2018.06.018.
2
Establishment of sister chromatid cohesion at the S. cerevisiae replication fork.酿酒酵母复制叉处姐妹染色单体黏连的建立。
Mol Cell. 2006 Sep 15;23(6):787-99. doi: 10.1016/j.molcel.2006.08.018. Epub 2006 Sep 7.
3
Cohesion between sister chromatids must be established during DNA replication.姐妹染色单体之间的黏连必须在DNA复制过程中建立。
Curr Biol. 1998 Oct 8;8(20):1095-101. doi: 10.1016/s0960-9822(98)70463-4.
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Mrc1 is required for sister chromatid cohesion to aid in recombination repair of spontaneous damage.Mrc1对于姐妹染色单体黏连是必需的,以帮助修复自发损伤的重组。
Mol Cell Biol. 2004 Aug;24(16):7082-90. doi: 10.1128/MCB.24.16.7082-7090.2004.
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Replisome progression complex links DNA replication to sister chromatid cohesion in Xenopus egg extracts.复制体推进复合物将 DNA 复制与 Xenopus 卵提取物中的姐妹染色单体黏合联系起来。
Genes Cells. 2009 Aug;14(8):949-63. doi: 10.1111/j.1365-2443.2009.01322.x. Epub 2009 Jul 19.
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E3 ubiquitin ligase Bre1 couples sister chromatid cohesion establishment to DNA replication in .E3 泛素连接酶 Bre1 将姐妹染色单体黏合建立与 DNA 复制偶联起来。
Elife. 2017 Oct 23;6:e28231. doi: 10.7554/eLife.28231.
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Cohesin dynamic association to chromatin and interfacing with replication forks in genome integrity maintenance.黏连蛋白与染色质的动态关联以及在基因组完整性维持中与复制叉的相互作用。
Curr Genet. 2018 Oct;64(5):1005-1013. doi: 10.1007/s00294-018-0824-x. Epub 2018 Mar 16.
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Sister chromatid cohesion is required for postreplicative double-strand break repair in Saccharomyces cerevisiae.在酿酒酵母中,姐妹染色单体黏连对于复制后双链断裂修复是必需的。
Curr Biol. 2001 Jun 26;11(12):991-5. doi: 10.1016/s0960-9822(01)00271-8.
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Interaction of the Warsaw breakage syndrome DNA helicase DDX11 with the replication fork-protection factor Timeless promotes sister chromatid cohesion.华沙断裂综合征 DNA 解旋酶 DDX11 与复制叉保护因子 Timeless 的相互作用促进姐妹染色单体黏合。
PLoS Genet. 2018 Oct 10;14(10):e1007622. doi: 10.1371/journal.pgen.1007622. eCollection 2018 Oct.
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Condensin is required for chromosome arm cohesion during mitosis.有丝分裂期间,染色体臂的黏连需要凝聚素。
Genes Dev. 2006 Nov 1;20(21):2973-84. doi: 10.1101/gad.1468806.

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Microsatellite break-induced replication generates highly mutagenized extrachromosomal circular DNAs.微卫星断裂诱导复制产生高度诱变的染色体外环状DNA。
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Transcription factor exchange enables prolonged transcriptional bursts.转录因子交换使转录爆发得以延长。
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Rrm3 and Pif1 division of labor during replication through leading and lagging strand G-quadruplex.Rrm3 和 Pif1 在通过领头链和滞后链 G-四链体进行复制时的分工。
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