G. N. Ramachandran Protein Centre, Structural Biology Laboratory, Council of Scientific and Industrial Research-Institute of Microbial Technology (CSIR-IMTECH), Chandigarh, 160036, India.
Division of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Roosevelt Drive, Oxford, OX3 7BN, UK.
Sci Rep. 2018 Jul 4;8(1):10124. doi: 10.1038/s41598-018-28290-4.
CarD is an essential global transcription regulator from Mycobacterium tuberculosis (Mtb) that binds RNA polymerase and activates transcription by stabilizing the transcription initiation complex. Available crystal structures have captured two distinct, monomeric and domain-swapped homodimeric, oligomeric states of CarD. However, the actual oligomeric state of CarD in solution and its biological relevance has remained unclear. Here, we confirm the presence of the homodimeric state of CarD in solution by using synchrotron-based small-angle X-ray scattering. Furthermore, by using biochemical and biophysical experiments, in addition to mass-spectrometry, transmission electron microscopy, and confocal imaging, we show that CarD is the first soluble cytosolic protein in Mtb which displays the tendency to form amyloid-like fibrils both in vitro as well as in vivo. We demonstrate that the deletion of the fourteen N-terminal residues involved in domain-swapping hampers amyloid formation, thus, suggesting that domain-swapping is crucial in amyloidogenesis. The discovery of the amyloidogenic property of an essential cytosolic global transcription regulator, CarD, in a pathogenic bacteria will further open up new frontiers in research.
CarD 是结核分枝杆菌(Mtb)中一种重要的全球转录调节剂,它与 RNA 聚合酶结合并通过稳定转录起始复合物来激活转录。现有的晶体结构已经捕获了 CarD 的两种不同的单体和域交换同源二聚体的寡聚状态。然而,CarD 在溶液中的实际寡聚状态及其生物学相关性仍不清楚。在这里,我们通过基于同步加速器的小角度 X 射线散射确认了 CarD 在溶液中存在同源二聚体状态。此外,通过生化和生物物理实验,以及质谱、透射电子显微镜和共聚焦成像,我们表明 CarD 是 Mtb 中第一个可溶性胞质溶胶蛋白,它在体外和体内都表现出形成类似淀粉样纤维的趋势。我们证明,删除涉及域交换的 14 个 N 端残基会阻碍淀粉样纤维的形成,因此,表明域交换对于淀粉样纤维形成至关重要。在致病性细菌中发现必需的胞质溶胶全局转录调节剂 CarD 的淀粉样纤维形成特性将为研究开辟新的前沿。