Campbell I D, Dobson C M, Williams R J
Biochem J. 1985 Oct 1;231(1):1-10. doi: 10.1042/bj2310001.
By the use of examples, mainly of rather rigid proteins, we hope to have shown that conformational analysis of proteins is a problem that is not simply related to the conformational analysis of small molecules. The primary difficulties with proteins are (1) the multitude of possible conformers, (2) the complex dynamical behaviour and (3) the degree of co-operativity within the molecules. Any experimentally derived structural description of a protein is an attempt to represent some average of a complex time dependence. N.m.r. techniques have now reached the point where it is possible to use them to describe many detailed structural features of small globular proteins in solution and to detect and to describe conformational changes in such proteins. In addition, analysis is becoming possible of much less ordered regions of polypeptides, such as are found in less compact proteins, of for example myosin, histones and virus coat proteins, or in denatured states. The limits to the detailed conformational analysis of such proteins are likely to be ones of reality rather than method but the description of the properties shown in Table 1 is by its very nature an extremely important problem in conformational analysis of dynamic macromolecules.
通过使用主要是相当刚性的蛋白质的例子,我们希望已经表明,蛋白质的构象分析是一个与小分子的构象分析并非简单相关的问题。蛋白质的主要困难在于:(1)可能的构象异构体数量众多;(2)复杂的动力学行为;(3)分子内的协同程度。任何通过实验得出的蛋白质结构描述都是试图呈现某种复杂时间依赖性的平均值。核磁共振技术目前已经发展到可以用它们来描述溶液中小球状蛋白质的许多详细结构特征,并检测和描述此类蛋白质的构象变化。此外,对于多肽中不太有序的区域,比如在结构不太紧密的蛋白质(例如肌球蛋白、组蛋白和病毒衣壳蛋白)中,或者在变性状态下发现的区域,分析也变得可行。对此类蛋白质进行详细构象分析的限制可能在于实际情况而非方法,但是表1中所示性质的描述本质上是动态大分子构象分析中一个极其重要的问题。