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噬菌体Mu转座起始时DNA链转移反应的一个明确系统:蛋白质和DNA底物要求。

A defined system for the DNA strand-transfer reaction at the initiation of bacteriophage Mu transposition: protein and DNA substrate requirements.

作者信息

Craigie R, Arndt-Jovin D J, Mizuuchi K

出版信息

Proc Natl Acad Sci U S A. 1985 Nov;82(22):7570-4. doi: 10.1073/pnas.82.22.7570.

DOI:10.1073/pnas.82.22.7570
PMID:2999771
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC391374/
Abstract

An early step in the transposition of bacteriophage Mu DNA in vitro is a DNA strand-transfer reaction that generates an intermediate DNA structure in which the Mu donor DNA and the target DNA are covalently joined. DNA replication, initiated at the DNA forks in this intermediate, generates a cointegrate product; simple insert products can also be formed from the same intermediate by degradation of a specific segment of the structure, followed by gap repair. This DNA strand-transfer reaction requires ATP, magnesium, the Mu A and Mu B proteins, and a factor supplied by an Escherichia coli cell extract. We have now shown that the host protein factor requirement can be satisfied by purified protein HU. The defined system has been used to determine the DNA substrate requirements for the reaction. The reaction requires the two Mu ends, located on the same DNA molecule, in the same relative orientation to one another as in the phage Mu genome. To participate in the strand-transfer reaction efficiently the mini-Mu plasmid, used as the transposon donor, must be supercoiled; the target DNA molecule may be supercoiled, relaxed circular, or linear.

摘要

噬菌体Mu DNA体外转座的早期步骤是一个DNA链转移反应,该反应产生一种中间DNA结构,其中Mu供体DNA和靶DNA共价连接。在这个中间体的DNA叉处起始的DNA复制产生一个共整合产物;简单的插入产物也可以由相同的中间体通过结构特定片段的降解,随后进行缺口修复而形成。这个DNA链转移反应需要ATP、镁、Mu A和Mu B蛋白,以及大肠杆菌细胞提取物提供的一个因子。我们现在已经表明,宿主蛋白因子的需求可以由纯化的HU蛋白满足。这个明确的系统已被用于确定该反应对DNA底物的要求。该反应需要位于同一DNA分子上的两个Mu末端,它们彼此之间的相对方向与噬菌体Mu基因组中的相同。作为转座子供体的微型Mu质粒要有效地参与链转移反应,必须是超螺旋的;靶DNA分子可以是超螺旋的、松弛环状的或线性的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25f2/391374/7e812cc0f86c/pnas00362-0107-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25f2/391374/b13294fe88db/pnas00362-0106-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25f2/391374/226916afa756/pnas00362-0106-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25f2/391374/3d63647da659/pnas00362-0106-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25f2/391374/f3b2cc082482/pnas00362-0106-d.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25f2/391374/e69c430f36ed/pnas00362-0107-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25f2/391374/301f0ebbf143/pnas00362-0107-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25f2/391374/7e812cc0f86c/pnas00362-0107-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25f2/391374/b13294fe88db/pnas00362-0106-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25f2/391374/226916afa756/pnas00362-0106-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25f2/391374/3d63647da659/pnas00362-0106-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25f2/391374/f3b2cc082482/pnas00362-0106-d.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25f2/391374/e69c430f36ed/pnas00362-0107-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25f2/391374/301f0ebbf143/pnas00362-0107-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/25f2/391374/7e812cc0f86c/pnas00362-0107-c.jpg

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本文引用的文献

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In vitro transposition of bacteriophage Mu: a biochemical approach to a novel replication reaction.噬菌体Mu的体外转座:一种针对新型复制反应的生化方法。
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Infecting bacteriophage mu DNA forms a circular DNA-protein complex.
Curr Issues Mol Biol. 2021;42:223-266. doi: 10.21775/cimb.042.223. Epub 2020 Dec 10.
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An Atypical AAA+ ATPase Assembly Controls Efficient Transposition through DNA Remodeling and Transposase Recruitment.一种非典型AAA+ ATP酶组装体通过DNA重塑和转座酶招募来控制高效转座。
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MuB gives a new twist to target DNA selection.MuB为目标DNA选择带来了新变化。
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Transposable prophage Mu is organized as a stable chromosomal domain of E. coli.可转移的前噬菌体 Mu 组织为大肠杆菌染色体的稳定结构域。
PLoS Genet. 2013 Nov;9(11):e1003902. doi: 10.1371/journal.pgen.1003902. Epub 2013 Nov 7.
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MuB is an AAA+ ATPase that forms helical filaments to control target selection for DNA transposition.MuB 是一种 AAA+ ATP 酶,它形成螺旋丝来控制 DNA 转座的靶标选择。
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A new role for translation initiation factor 2 in maintaining genome integrity.翻译起始因子 2 在维持基因组完整性方面的新作用。
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