Suppr超能文献

基于 DNA 条形码的不同地理区域的遗传多态性研究。

Genetic Polymorphism Study on of Different Geographical Regions Based on DNA Barcoding.

机构信息

Fujian International Travel Healthcare Center, Fuzhou, Fujian 350001, China.

Quanzhou Entry-Exit Inspection and Quarantine Bureau Comprehensive Technical Service Center, Quanzhou 362000, Fujian Province, China.

出版信息

Biomed Res Int. 2018 May 29;2018:1501430. doi: 10.1155/2018/1501430. eCollection 2018.

Abstract

is a very important vector for pathogens of many infectious diseases including dengue fever. In this study, we explored the genetic polymorphism of strains in different geographical regions using DNA barcoding of mitochondrial COI () gene. We collected sequence of 106 mosquitos from 6 provinces in China including Fujian, Guangdong, Hainan, Yunnan, and Taiwan. The length of the sequences is 709bp with the content of A+T (67.7%) greater than that of G+C (32.3%). We identified mutations in 90 (13.68%) loci, of which 57 (63.33%) are transitions, 28 (31.11%) are transversions, and 5 (5.56%) are hypervariable loci. In addition, we obtained 42 haplotypes, 4 (9.52%) of which are shared among different populations. The haplotype diversity of is 0.882 and nucleotide diversity is 0.01017. Moreover, the pedigree network diagram shows that most haplotypes are under parallel evolution, suggesting a local expansion of in history. Finally, the Neighbor-Joining tree of haplotypes reveals a certain correlation between haplotype clusters and geographical distribution, and there are differences among in different geographical regions. In conclusion, DNA barcoding of gene is an effective method to study the genetic structure of .

摘要

是许多传染病病原体的重要载体,包括登革热。在这项研究中,我们使用线粒体 COI()基因的 DNA 条码技术探索了不同地理区域 株的遗传多态性。我们从中国的 6 个省(福建、广东、海南、云南和台湾)收集了 106 只蚊子的 序列。序列长度为 709bp,A+T(67.7%)含量大于 G+C(32.3%)。我们在 90 个(13.68%)位点发现了突变,其中 57 个(63.33%)是转换,28 个(31.11%)是颠换,5 个(5.56%)是高变位点。此外,我们获得了 42 个单倍型,其中 4 个(9.52%)在不同种群中共享。的单倍型多样性为 0.882,核苷酸多样性为 0.01017。此外,系谱网络图显示,大多数单倍型处于平行进化状态,表明在历史上 发生了局部扩张。最后,单倍型的邻接法树揭示了单倍型聚类与地理分布之间存在一定的相关性,不同地理区域的 存在差异。总之,基因的 DNA 条码技术是研究 的遗传结构的有效方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddb9/5996416/dd92b8663ad7/BMRI2018-1501430.001.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验