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序列重排可能会改变重组质粒在体内的超螺旋状态。

Sequence rearrangements may alter the in vivo superhelicity of recombinant plasmids.

作者信息

Amster O, Zamir A

出版信息

FEBS Lett. 1986 Mar 3;197(1-2):93-8. doi: 10.1016/0014-5793(86)80305-2.

DOI:10.1016/0014-5793(86)80305-2
PMID:3005048
Abstract

Electrophoretic resolution of topoisomers was used to compare the in vivo superhelicity of recombinant plasmids containing a fragment of cDNA for an immunoglobulin light chain, cloned in the two possible orientations into the BamHI site of pBR313 or pBR322. Previously, frequent transpositions of IS1 or IS5 were observed into the sequence upstream to the cloned fragment in recombinants in one orientation [(+) plasmids] but not in recombinants in the opposite, (-) orientation [(1982) Nucleic Acids Res. 10, 4525-4542]. The results of the present analyses show that, on average, (-) plasmids are less negatively supercoiled than (+) plasmids, or pBR322. These results suggest that primary sequence rearrangements in plasmids could affect their in vivo topological state, and consequently, perhaps, their effectiveness as recipients of transposable elements.

摘要

采用拓扑异构体的电泳分辨率来比较重组质粒的体内超螺旋状态,这些重组质粒含有免疫球蛋白轻链cDNA片段,以两种可能的方向克隆到pBR313或pBR322的BamHI位点。以前,在一种方向的重组体((+)质粒)中,观察到IS1或IS5频繁转座到克隆片段上游的序列中,但在相反方向((-)方向)的重组体中则没有((1982)《核酸研究》10, 4525 - 4542)。目前的分析结果表明,平均而言,(-)质粒的负超螺旋程度低于(+)质粒或pBR322。这些结果表明,质粒中的一级序列重排可能会影响其体内拓扑状态,因此,也许还会影响其作为转座元件受体的有效性。

相似文献

1
Sequence rearrangements may alter the in vivo superhelicity of recombinant plasmids.序列重排可能会改变重组质粒在体内的超螺旋状态。
FEBS Lett. 1986 Mar 3;197(1-2):93-8. doi: 10.1016/0014-5793(86)80305-2.
2
A cloned immunoglobulin cDNA fragment enhances transposition of IS elements into recombinant plasmids.一个克隆的免疫球蛋白cDNA片段增强了IS元件向重组质粒的转座作用。
Nucleic Acids Res. 1982 Aug 11;10(15):4525-42. doi: 10.1093/nar/10.15.4525.
3
The nucleotide sequence of IS5 from Escherichia coli.来自大肠杆菌的IS5的核苷酸序列。
Gene. 1981 Aug;14(3):165-74. doi: 10.1016/0378-1119(81)90112-8.
4
Early melting of supercoiled DNA topoisomers observed by TGGE.通过TGGE观察到超螺旋DNA拓扑异构体的早期解旋
Nucleic Acids Res. 2000 Jun 1;28(11):E51. doi: 10.1093/nar/28.11.e51.
5
[Thermosensitive vector derived from RP1 plasmid for detection of transposable elements].[用于检测转座元件的源自RP1质粒的热敏载体]
Mol Biol (Mosk). 1982 Jul-Aug;16(4):837-56.
6
Left-handed DNA. Cloning, characterization, and instability of inserts containing different lengths of (dC-dG) in Escherichia coli.左手螺旋DNA。大肠杆菌中含有不同长度(dC-dG)的插入片段的克隆、特性分析及不稳定性
J Biol Chem. 1982 Sep 10;257(17):10152-8.
7
Transitions in topological organization of supercoiled DNA domains as a potential regulatory mechanism.超螺旋DNA结构域拓扑组织的转变作为一种潜在的调控机制。
J Biol Chem. 1984 Oct 25;259(20):12633-43.
8
Structure and function in Escherichia coli of plasmids containing pyrimidine/purine-biased stretch originated from the 5'-flanking region of the basidiomycete ras gene.
J Biochem. 1997 Oct;122(4):696-702. doi: 10.1093/oxfordjournals.jbchem.a021811.
9
DNA supercoiling of recombinant plasmids in mammalian cells.哺乳动物细胞中重组质粒的DNA超螺旋
Proc Natl Acad Sci U S A. 1986 Mar;83(6):1641-5. doi: 10.1073/pnas.83.6.1641.
10
[Structural instability of co-integrates formed during interaction of plasmid R57 with pB322 and RP1. Possible role of IS1 element in the degradation of co-integrates].[质粒R57与pB322及RP1相互作用过程中形成的共整合体的结构不稳定性。IS1元件在共整合体降解中的可能作用]
Mol Biol (Mosk). 1986 May-Jun;20(3):683-96.

引用本文的文献

1
Frequency, composition and mobility of Escherichia coli-derived transposable elements in holdings of plasmid repositories.质粒库持存物中大肠杆菌衍生可移动元件的频率、组成和流动性。
Microb Biotechnol. 2022 Feb;15(2):455-468. doi: 10.1111/1751-7915.13962. Epub 2021 Dec 7.
2
Topoisomerase I mutants: the gene on pBR322 that encodes resistance to tetracycline affects plasmid DNA supercoiling.拓扑异构酶I突变体:pBR322上编码对四环素抗性的基因影响质粒DNA超螺旋。
Proc Natl Acad Sci U S A. 1986 Dec;83(23):8952-6. doi: 10.1073/pnas.83.23.8952.
3
IS5: a mobile enhancer of transcription in Escherichia coli.
IS5:大肠杆菌中转录的移动增强子。
Proc Natl Acad Sci U S A. 1992 Feb 15;89(4):1244-8. doi: 10.1073/pnas.89.4.1244.