Alisi Ikechukwu Ogadimma, Uzairu Adamu, Abechi Stephen Eyije, Idris Sulaiman Ola
Department of Applied Chemistry, Federal University Dutsinma, Katsina State, Nigeria.
Department of Chemistry, Ahmadu Bello University Zaria, Kaduna State, Nigeria.
J Adv Res. 2018 Mar 28;12:47-54. doi: 10.1016/j.jare.2018.03.003. eCollection 2018 Jul.
The prevalence of degenerative diseases in recent time has triggered extensive research on their control. This condition could be prevented if the body has an efficient antioxidant mechanism to scavenge the free radicals which are their main causes. Curcumin and its derivatives are widely employed as antioxidants. The free radical scavenging activities of curcumin and its derivatives have been explored in this research by the application of quantitative structure activity relationship (QSAR). The entire data set was optimized at the density functional theory (DFT) level using the Becke's three-parameter Lee-Yang-Parr hybrid functional (B3LYP) in combination with the 6-311G basis set. The training set was subjected to QSAR studies by genetic function algorithm (GFA). Five predictive QSAR models were developed and statistically subjected to both internal and external validations. Also the applicability domain of the developed model was accessed by the leverage approach. Furthermore, the variation inflation factor, (VIF), mean effect (MF) and the degree of contribution (DC) of each descriptor in the resulting model were calculated. The developed models met all the standard requirements for acceptability upon validation with highly impressive results ( ). Based on the results of this research, the most crucial descriptor that influence the free radical scavenge of the curcumins is the nsssN (count of atom-type E-state: >N-) descriptor with DC and MF values of 12.980 and 0.965 respectively.
近年来退行性疾病的流行引发了对其控制的广泛研究。如果身体具有有效的抗氧化机制来清除作为主要病因的自由基,这种情况是可以预防的。姜黄素及其衍生物被广泛用作抗氧化剂。本研究通过应用定量构效关系(QSAR)探讨了姜黄素及其衍生物的自由基清除活性。使用Becke三参数Lee-Yang-Parr杂化泛函(B3LYP)结合6-311G基组在密度泛函理论(DFT)水平上对整个数据集进行了优化。通过遗传函数算法(GFA)对训练集进行了QSAR研究。开发了五个预测性QSAR模型,并对其进行了内部和外部验证的统计分析。此外,通过杠杆法确定了所开发模型的适用范围。此外,还计算了所得模型中每个描述符的方差膨胀因子(VIF)、平均效应(MF)和贡献度(DC)。经验证,所开发的模型满足了所有可接受的标准要求,结果令人印象深刻( )。基于本研究结果,影响姜黄素自由基清除的最关键描述符是nsssN(原子类型E态计数:>N-)描述符,其DC和MF值分别为12.980和0.965。