Epidemiology Branch National Institute of Environmental Health Sciences, National Institutes of Health, US Department of Health and Human Services, Research Triangle Park, NC, 27709, USA.
Division of Sleep and Circadian Disorders, Brigham and Women's Hospital, Boston, MA, 02115, USA.
Nat Commun. 2018 Jul 30;9(1):2976. doi: 10.1038/s41467-018-05369-0.
Nearly 100 loci have been identified for pulmonary function, almost exclusively in studies of European ancestry populations. We extend previous research by meta-analyzing genome-wide association studies of 1000 Genomes imputed variants in relation to pulmonary function in a multiethnic population of 90,715 individuals of European (N = 60,552), African (N = 8429), Asian (N = 9959), and Hispanic/Latino (N = 11,775) ethnicities. We identify over 50 additional loci at genome-wide significance in ancestry-specific or multiethnic meta-analyses. Using recent fine-mapping methods incorporating functional annotation, gene expression, and differences in linkage disequilibrium between ethnicities, we further shed light on potential causal variants and genes at known and newly identified loci. Several of the novel genes encode proteins with predicted or established drug targets, including KCNK2 and CDK12. Our study highlights the utility of multiethnic and integrative genomics approaches to extend existing knowledge of the genetics of lung function and clinical relevance of implicated loci.
已有近 100 个与肺功能相关的基因座被鉴定出来,这些基因座几乎全部都是在对欧洲血统人群的研究中发现的。我们通过对来自欧洲(N=60552)、非洲(N=8429)、亚洲(N=9959)和西班牙裔/拉丁裔(N=11775)的 90715 名多民族个体进行全基因组关联研究的汇总分析,扩展了先前的研究。我们在特定祖先或多民族荟萃分析中鉴定出了超过 50 个额外的具有全基因组意义的基因座。利用最近的精细定位方法,结合功能注释、基因表达以及不同种族之间的连锁不平衡差异,我们进一步阐明了已知和新鉴定基因座中的潜在因果变异和基因。一些新基因编码的蛋白质具有预测或已确立的药物靶点,包括 KCNK2 和 CDK12。我们的研究强调了多民族和综合基因组学方法的实用性,这些方法可以扩展我们对肺功能遗传基础的现有认识,并阐明相关基因座的临床意义。