Cytoscape中的标识符映射
Identifier Mapping in Cytoscape.
作者信息
Treister Adam, Pico Alexander R
机构信息
Institute of Data Science and Biotechnology, Gladstone Institutes, San Francisco, CA, 94158, USA.
出版信息
F1000Res. 2018 Jun 11;7:725. doi: 10.12688/f1000research.14807.2. eCollection 2018.
Identifier Mapping, the association of terms across disparate taxonomies and databases, is a common hurdle in bioinformatics workflows. The app for Cytoscape simplifies identifier mapping for genes and proteins in the context of common biological networks. This app provides a unified interface to different identifier resources accessible through a right-click on the table's column header. It also provides an OSGi programming interface via and that can be utilized for identifier mapping in scripts and other Cytoscape apps, and supports integrated Swagger documentation.
标识符映射,即将不同分类法和数据库中的术语进行关联,是生物信息学工作流程中的一个常见障碍。Cytoscape的应用程序简化了在常见生物网络背景下基因和蛋白质的标识符映射。该应用程序提供了一个统一的界面,通过右键点击表格的列标题可访问不同的标识符资源。它还通过 和 提供了一个OSGi编程接口,可用于脚本和其他Cytoscape应用程序中的标识符映射,并支持集成的Swagger文档。
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