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通过交叉引物扩增对肠炎沙门氏菌印第安纳血清型进行灵敏快速检测。

Sensitive and rapid detection of Salmonella enterica serovar Indiana by cross-priming amplification.

作者信息

Wang Yong-Xiang, Zhang An-Yun, Yang Yong-Qiang, Lei Chang-Wei, Cheng Guang-Yang, Zou Wen-Cheng, Zeng Jin-Xin, Chen Yan-Peng, Wang Hong-Ning

机构信息

Key Laboratory of Bio-Resources and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China; Animal Disease Prevention and Food Safety Key Laboratory of Sichuan Province, Chengdu 610065, Sichuan, PR China.

Key Laboratory of Bio-Resources and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China; Animal Disease Prevention and Food Safety Key Laboratory of Sichuan Province, Chengdu 610065, Sichuan, PR China; "985 Project" Science Innovative Platform for Resource and Environment Protection of Southwestern, Key Laboratory of Bio-Resources and Eco-Environment of Ministry of Education, Sichuan University, Chengdu 610065, Sichuan, PR China.

出版信息

J Microbiol Methods. 2018 Oct;153:24-30. doi: 10.1016/j.mimet.2018.08.003. Epub 2018 Aug 9.

DOI:10.1016/j.mimet.2018.08.003
PMID:30099005
Abstract

Salmonella enterica serovar Indiana (S. Indiana) was the most frequently reported foodborne pathogen, which has a broad host range including poultry, swine, and humans. Traditional methods used for the detection of S. Indiana from contaminated food products are time-consuming and labor-intensive. Therefore, rapid detection methods with high sensitivity and specificity are vitally important to prevent the spread of S. Indiana. In this study, we developed a nearly instrument-free, simple molecular method which incorporates cross-priming amplification (CPA) combined with a nucleic acid detection strip (NADS) for sensitive detection of S. Indiana. A set of CPA primers was designed based on S. Indiana specific nucleotide sequences and the specificity of CPA-NADS was tested against 42 bacterial strains. The results showed that this method was highly specific for detection of S. Indiana. The sensitivity of CPA-NADS was evaluated and compared with that of the serovar-specific PCR method and the real-time PCR method. The limit of detection of the CPA method was 8.997 fg/μL for genomic DNA and 6.2 × 10 CFU/mL for bacteria in pure culture. An application of the CPA assay was conducted with 90 inoculated specimens by S. Indiana. The accuracy of CPA-NADS was consistent with the results of the traditional culture-based methods in inoculated specimens. This method showed a higher sensitivity than the serovar-specific PCR method did and was more convenient to perform. In conclusion, we demonstrated that the CPA-NADS system offers high specificity, sensitivity, rapidity, and a simple detection tool for screening S. Indiana.

摘要

肠炎沙门氏菌印第安纳血清型(S. Indiana)是报告频率最高的食源性病原体,其宿主范围广泛,包括家禽、猪和人类。从受污染食品中检测S. Indiana的传统方法既耗时又费力。因此,具有高灵敏度和特异性的快速检测方法对于预防S. Indiana的传播至关重要。在本研究中,我们开发了一种几乎无需仪器的简单分子方法,该方法将交叉引物扩增(CPA)与核酸检测条(NADS)相结合,用于灵敏检测S. Indiana。基于S. Indiana的特异性核苷酸序列设计了一组CPA引物,并针对42株细菌测试了CPA-NADS的特异性。结果表明,该方法对S. Indiana的检测具有高度特异性。评估了CPA-NADS的灵敏度,并与血清型特异性PCR方法和实时PCR方法进行了比较。CPA方法对基因组DNA的检测限为8.997 fg/μL,对纯培养细菌的检测限为6.2×10 CFU/mL。用90份接种了S. Indiana的标本进行了CPA检测的应用。CPA-NADS在接种标本中的准确性与传统培养方法的结果一致。该方法显示出比血清型特异性PCR方法更高的灵敏度,并且操作更方便。总之,我们证明了CPA-NADS系统为筛选S. Indiana提供了高特异性、灵敏度、快速性和简单的检测工具。

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