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噬菌体SP6 RNA聚合酶的三种启动子序列。

Sequences of three promoters for the bacteriophage SP6 RNA polymerase.

作者信息

Brown J E, Klement J F, McAllister W T

出版信息

Nucleic Acids Res. 1986 Apr 25;14(8):3521-6. doi: 10.1093/nar/14.8.3521.

DOI:10.1093/nar/14.8.3521
PMID:3010240
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC339790/
Abstract

Fragments of SP6 DNA generated by cleavage with Hpa II or Taq I were cloned into the Cla I site of pBR322 and the recombinant plasmids were screened for the presence of SP6 promoter activity by transcription in vitro with purified SP6 RNA polymerase. Three plasmids having promoter activity and small inserts of SP6 DNA were characterized. Hybridization studies showed that all three cloned promoters arose from different regions of the SP6 genome. Comparison of the consensus promoter sequence (5' ATTTAGGtgGACACTATAGAAGgaG 3') with the consensus sequences of promoters recognized by the T3 and T7 RNA polymerases reveals a common core sequence (5'-CACTA-3') extending from -7 to -3, as well as other features that may be important in selective promoter recognition by the phage RNA polymerases.

摘要

用Hpa II或Taq I切割产生的SP6 DNA片段被克隆到pBR322的Cla I位点,通过用纯化的SP6 RNA聚合酶进行体外转录来筛选重组质粒中SP6启动子活性的存在。对三个具有启动子活性且带有SP6 DNA小插入片段的质粒进行了表征。杂交研究表明,所有三个克隆的启动子都来自SP6基因组的不同区域。将共有启动子序列(5' ATTTAGGtgGACACTATAGAAGgaG 3')与T3和T7 RNA聚合酶识别的启动子共有序列进行比较,发现了一个从-7到-3延伸的共同核心序列(5'-CACTA-3'),以及其他可能在噬菌体RNA聚合酶选择性识别启动子中起重要作用的特征。

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2
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本文引用的文献

1
Recognition and initiation site for four late promoters of phage T7 is a 22-base pair DNA sequence.噬菌体T7四个晚期启动子的识别和起始位点是一段22个碱基对的DNA序列。
Nature. 1979 Jul 5;280(5717):35-9. doi: 10.1038/280035a0.
2
Regulation of promoter selection by the bacteriophage T7 RNA polymerase in vitro.噬菌体T7 RNA聚合酶在体外对启动子选择的调控
Nucleic Acids Res. 1980 Oct 24;8(20):4821-37. doi: 10.1093/nar/8.20.4821.
3
Bacteriophage SP6-specific RNA polymerase. I. Isolation and characterization of the enzyme.噬菌体SP6特异性RNA聚合酶。I. 酶的分离与特性鉴定。
J Biol Chem. 1982 May 25;257(10):5772-8.
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Complete nucleotide sequence of bacteriophage T7 DNA and the locations of T7 genetic elements.噬菌体T7 DNA的完整核苷酸序列及T7遗传元件的定位
J Mol Biol. 1983 Jun 5;166(4):477-535. doi: 10.1016/s0022-2836(83)80282-4.
5
Relationship between promoter structure and template specificities exhibited by the bacteriophage T3 and T7 RNA polymerases.噬菌体T3和T7 RNA聚合酶所展现的启动子结构与模板特异性之间的关系。
Proc Natl Acad Sci U S A. 1983 May;80(10):2814-8. doi: 10.1073/pnas.80.10.2814.
6
Bacteriophage T7 late promoters: construction and in vitro transcription properties of deletion mutants.噬菌体T7晚期启动子:缺失突变体的构建及体外转录特性
Nucleic Acids Res. 1982 Oct 25;10(20):6331-40. doi: 10.1093/nar/10.20.6331.
7
Bacteriophage SP6-specific RNA polymerase. II. Mapping of SP6 DNA and selective in vitro transcription.噬菌体SP6特异性RNA聚合酶。II. SP6 DNA的图谱绘制及体外选择性转录
J Biol Chem. 1982 May 25;257(10):5779-88.
8
T7 ribonucleic acid polymerase-promotor interactions.T7核糖核酸聚合酶与启动子的相互作用。
Biochemistry. 1981 Aug 18;20(17):4884-92. doi: 10.1021/bi00520a013.
9
Sequencing end-labeled DNA with base-specific chemical cleavages.通过碱基特异性化学切割对末端标记的DNA进行测序。
Methods Enzymol. 1980;65(1):499-560. doi: 10.1016/s0076-6879(80)65059-9.
10
Efficient in vitro synthesis of biologically active RNA and RNA hybridization probes from plasmids containing a bacteriophage SP6 promoter.从含有噬菌体SP6启动子的质粒中高效体外合成生物活性RNA和RNA杂交探针。
Nucleic Acids Res. 1984 Sep 25;12(18):7035-56. doi: 10.1093/nar/12.18.7035.