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-甘氨酸-丙氨酸-氧·0.5钙·水合物和-甘氨酸-丙氨酸-羟基的晶体结构。

Crystal structures of -Gly-Aib-O·0.5Ca·HO and -Gly-Aib-OH.

作者信息

Gessmann Renate, Brückner Hans, Petratos Kyriacos

机构信息

IMBB-FORTH, 70013 Heraklion, Greece.

Department of Food Sciences, Interdisciplinary Research Center, Justus-Liebig-University of Giessen, 35392 Giessen, Germany.

出版信息

Acta Crystallogr E Crystallogr Commun. 2018 Jul 27;74(Pt 8):1173-1177. doi: 10.1107/S2056989018010745. eCollection 2018 Aug 1.

DOI:10.1107/S2056989018010745
PMID:30116587
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6073005/
Abstract

Both deprotonated and neutral achiral title dipeptides assume similar structures of two conformations, which are related by a unit-cell inversion centre. Two mol-ecules of both conformations of the metal-free neutral dipeptide are linked by two hydrogen bonds, while two mol-ecules of both conformations of the ionized form coordinate a calcium ion in calcium(II) bis-[2-(2-{[(benz-yl-oxy)carbon-yl]amino}-acetamido)-2-methyl-propano-ate] monohydrate, 0.5Ca·CHNO·0.5HO, which lies on an inversion centre and forms a distorted octa-hedral complex with the metal ion. These Ca complexes are connected in the crystal hydrogen bonds in the - and -axis directions, whereas in the -axis direction, they stack apolar contacts. In the metal-free crystal, namely 2-(2-{[(benz-yloxy)carbon-yl]amino}-acetamido)-2-methyl-propanoic acid, CHNO, mol-ecules are hydrogen bonded in the - and -axis directions, and stack in the -axis direction apolar contacts.

摘要

去质子化和中性的非手性标题二肽都呈现出两种构象的相似结构,这两种构象通过晶胞反演中心相互关联。无金属中性二肽的两种构象的两个分子通过两个氢键相连,而离子化形式的两种构象的两个分子在一水合钙(II)双-[2-(2-{[(苄氧基)羰基]氨基}-乙酰胺基)-2-甲基-丙酸酯],0.5Ca·C₁₇H₂₅NO₅·0.5H₂O中配位一个钙离子,该钙离子位于一个反演中心上,并与金属离子形成一个扭曲的八面体配合物。这些钙配合物在晶体中沿a和b轴方向通过氢键相连,而在c轴方向上,它们通过非极性接触堆积。在无金属晶体中,即2-(2-{[(苄氧基)羰基]氨基}-乙酰胺基)-2-甲基-丙酸,C₁₇H₂₅NO₅,分子在a和b轴方向上通过氢键相连,并在c轴方向上通过非极性接触堆积。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89fb/6073005/cfec85a65d47/e-74-01173-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89fb/6073005/44891e730853/e-74-01173-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89fb/6073005/d54392f20d85/e-74-01173-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89fb/6073005/299105aeee8d/e-74-01173-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89fb/6073005/cfec85a65d47/e-74-01173-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89fb/6073005/44891e730853/e-74-01173-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89fb/6073005/d54392f20d85/e-74-01173-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89fb/6073005/299105aeee8d/e-74-01173-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89fb/6073005/cfec85a65d47/e-74-01173-fig4.jpg

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