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猕猴桃栽培品种内生微生物群落的比较

Comparison of Endophytic Microbial Community in Kiwifruit Plant Cultivars.

作者信息

Cho Gyeongjun, Kim Min-Jung, Kwon Youngho, Kwak Youn-Sig

机构信息

Division of Applied Life Science (BK21Plus), Institute of Agriculture & Life Science, Gyeongsang National University, Jinju 52828, Korea.

Department of Plant Medicine, Gyeongsang National University, Jinju 52828, Korea.

出版信息

Plant Pathol J. 2018 Aug;34(4):341-346. doi: 10.5423/PPJ.NT.12.2017.0284. Epub 2018 Aug 1.

Abstract

The microbiome makes a significant contribution to plant health and endophytes may generate positive effects for the host. However, there is a limited knowledge available concerning the kiwifruit endophyte. Therefore, we discuss endophyte microbiome community structures among the kiwifruit cultivars. Total reads numbered 17620 in cv. Hayward, 11515 in cv. Haegeum and 13613 in cv. Jecygold. The number of OTUs was follows: 112 in cv. Hageum; and 87 in cvs. Hayward and Jecygold. Most of the identified OTUs were phylum Proteobacteria and it emerged that Actinobacteria, Firmicute and Bacteroidetes were mainly present. While the largest difference in Proteobacteria content is between cv. Haegeum and cv. Jecygold, they shared more OTUs than cv. Hayward. As well, this study revealed the presence of remarkably dominated OTU of spp. in kiwifruit sap regardless of cultivars. To the best of our knowledge, this study is the first tone to investigate the kiwifruit endophyte-microbiome community.

摘要

微生物组对植物健康有重大贡献,而内生菌可能对宿主产生积极影响。然而,关于猕猴桃内生菌的现有知识有限。因此,我们讨论了猕猴桃品种间内生菌微生物群落结构。海沃德品种的总读数为17620,黑鸡心品种为11515,杰西金品种为13613。OTU数量如下:黑鸡心品种有112个;海沃德品种和杰西金品种有87个。鉴定出的大多数OTU属于变形菌门,放线菌门、厚壁菌门和拟杆菌门也主要存在。虽然变形菌门含量的最大差异存在于黑鸡心品种和杰西金品种之间,但它们共享的OTU比海沃德品种更多。此外,本研究还揭示了无论品种如何,猕猴桃汁液中都存在显著占主导地位的OTU。据我们所知,本研究是首次对猕猴桃内生菌-微生物群落进行调查。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/acb2/6097820/ec2465611f35/ppj-34-341f1.jpg

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