Turnbull Clare, Sud Amit, Houlston Richard S
Division of Genetics and Epidemiology, Institute of Cancer Research, London, UK.
William Harvey Research Institute, Queen Mary University, London, UK.
Nat Genet. 2018 Sep;50(9):1212-1218. doi: 10.1038/s41588-018-0202-0. Epub 2018 Aug 29.
More than 15 years have passed since the identification, through linkage, of 'first-wave' susceptibility genes for common cancers (BRCA1, BRCA2, MLH1 and MSH2). These genes have strong frequency-penetrance profiles, such that the associated clinical utility probably remains relevant regardless of the context of ascertainment. 'Second-wave' genes, not tractable by linkage, were subsequently identified by mutation screening of candidate genes (PALB2, ATM, CHEK2, BRIP1, RAD51C and RAD51D). Their innately weaker frequency-penetrance profiles have rendered delineation of cancer associations, risks and variant pathogenicity challenging, thereby compromising their clinical application. Early germline exome-sequencing endeavors for common cancers did not yield the long-anticipated slew of 'next-wave' genes but instead implied a highly polygenic genomic architecture requiring much larger experiments to make any substantive inroads into gene discovery. As such, the 'genetic economics' of frequency penetrance clearly indicates that focused identification of carriers of first-wave-gene mutations is most impactful for cancer control. With screening, prevention and early detection at the forefront of the cancer management agenda, we propose that the time is nigh for the initiation of national population-testing programs to identify carriers of first-wave gene mutation carriers. To fully deliver a precision prevention program, long-term, large-scale mutation studies that capture longitudinal clinical data and serial biosamples are required.
自通过连锁分析鉴定出常见癌症的“第一波”易感基因(BRCA1、BRCA2、MLH1和MSH2)以来,已经过去了15年多。这些基因具有很强的频率-外显率特征,因此无论确定的背景如何,相关的临床效用可能仍然具有相关性。随后,通过对候选基因(PALB2、ATM、CHEK2、BRIP1、RAD51C和RAD51D)进行突变筛查,鉴定出了无法通过连锁分析确定的“第二波”基因。它们固有的频率-外显率特征较弱,使得确定癌症关联、风险和变异致病性具有挑战性,从而影响了它们的临床应用。早期针对常见癌症的种系外显子测序工作并未产生人们长期期待的大量“下一波”基因,反而暗示了一种高度多基因的基因组结构,需要进行更大规模的实验才能在基因发现方面取得实质性进展。因此,频率外显率的“遗传经济学”清楚地表明,重点识别第一波基因突变携带者对癌症控制最具影响力。鉴于筛查、预防和早期检测处于癌症管理议程的前沿,我们认为启动全国性人群检测项目以识别第一波基因突变携带者的时机已经成熟。为了全面实施精准预防计划,需要进行长期、大规模的突变研究,以获取纵向临床数据和系列生物样本。