Department of Biology, Massachusetts Institute of Technology, Cambridge, United States.
Department of Structural & Chemical Biology, Centro de Investigaciones Biológicas, Madrid, Spain.
Elife. 2018 Aug 31;7:e40889. doi: 10.7554/eLife.40889.
Monotopic membrane proteins integrate into the lipid bilayer via reentrant hydrophobic domains that enter and exit on a single face of the membrane. Whereas many membrane-spanning proteins have been structurally characterized and transmembrane topologies can be predicted computationally, relatively little is known about the determinants of membrane topology in monotopic proteins. Recently, we reported the X-ray structure determination of PglC, a full-length monotopic membrane protein with phosphoglycosyl transferase (PGT) activity. The definition of this unique structure has prompted in vivo, biochemical, and computational analyses to understand and define key motifs that contribute to the membrane topology and to provide insight into the dynamics of the enzyme in a lipid bilayer environment. Using the new information gained from studies on the PGT superfamily we demonstrate that two motifs exemplify principles of topology determination that can be applied to the identification of reentrant domains among diverse monotopic proteins of interest.
单次跨膜蛋白通过重新进入的疏水域整合到脂质双层中,这些疏水域在膜的单个面上进出。虽然许多跨膜蛋白的结构已经得到了表征,并且跨膜拓扑结构可以通过计算进行预测,但关于单次跨膜蛋白的膜拓扑结构决定因素,我们知之甚少。最近,我们报道了 PglC 的 X 射线结构测定,PglC 是一种具有磷酸糖基转移酶(PGT)活性的全长单次跨膜蛋白。该独特结构的定义促使进行体内、生化和计算分析,以了解和定义有助于膜拓扑结构的关键基序,并深入了解在脂质双层环境中酶的动力学。利用从 PGT 超家族研究中获得的新信息,我们证明了两个基序体现了拓扑结构确定的原则,这些原则可应用于鉴定各种感兴趣的单次跨膜蛋白中的重新进入域。