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环境参数而非系统发育决定了极端环境中微生物垫中细胞外聚合物的组成。

Environmental parameters, and not phylogeny, determine the composition of extracellular polymeric substances in microbial mats from extreme environments.

机构信息

Centro de Astrobiología (INTA-CSIC), Instituto Nacional de Técnica Aeroespacial, Carretera de Ajalvir Km 4, Torrejón de Ardoz, 28850 Madrid, Spain.

Systems Biology Program, Centro Nacional de Biotecnología, C/Darwin n° 3, Campus de Cantoblanco, 28049 Madrid, Spain.

出版信息

Sci Total Environ. 2019 Feb 10;650(Pt 1):384-393. doi: 10.1016/j.scitotenv.2018.08.440. Epub 2018 Sep 1.

DOI:10.1016/j.scitotenv.2018.08.440
PMID:30199683
Abstract

The ability to establish biofilms is a key trait for microorganisms growing in extreme environments. The extracellular polymeric substances (EPS) present in biofilms provide not only surface attachment, but also protection against all kinds of environmental stressors, including desiccation, salinity, temperature or heavy metal pollution. The acquisition of suitable biofilm characteristics might thus be an important process mediating the adaptation of microorganisms to novel environmental conditions. In this work we have characterized the EPS of 20 phylogenetically diverse biofilms collected in situ from five contrasting extreme environments, including two geothermal areas (Copahue, Argentina; Seltun, Iceland), two cold areas (Pastoruri glacier, Peru; Byers Peninsula, Antarctica) and one extremely acidic river (Río Tinto, Spain). Biofilms were subjected to biochemical characterization, glycan profiling and immunoprofiling with an antibody microarray. Our results showed that environmental conditions strongly influence biofilm characteristics, with microorganisms from the same environment achieving similar EPS compositions regardless of the phylogeny of their main species. The concentration of some monosaccharides in the EPS could be related to environmental conditions such as temperature or heavy metal toxicity, suggesting that in some cases stress resistance can be mediated by specific sugars. Overall, our results highlight the existence of conserved EPS compositional patterns for each extreme environment, which could in turn be exploited to engineer ecological adaptations in genetically modified microorganisms.

摘要

在极端环境中生长的微生物具有形成生物膜的能力,这是它们的一个关键特征。生物膜中存在的细胞外聚合物质(EPS)不仅提供了表面附着的能力,还能保护微生物免受各种环境胁迫,包括干燥、盐度、温度或重金属污染。因此,获得合适的生物膜特性可能是微生物适应新环境条件的一个重要过程。在这项工作中,我们对从五个截然不同的极端环境中现场采集的 20 个具有不同系统发育多样性的生物膜的 EPS 进行了表征,这些环境包括两个地热区(阿根廷的科帕维、冰岛的塞尔顿)、两个冷区(秘鲁的帕斯托里乌冰川、南极洲的拜尔斯半岛)和一个极酸性河流(西班牙的里奥廷托河)。生物膜进行了生化特性、聚糖分析和用抗体微阵列进行免疫分析。我们的结果表明,环境条件强烈影响生物膜的特性,来自同一环境的微生物即使其主要物种的系统发育不同,也能达到相似的 EPS 组成。EPS 中某些单糖的浓度可能与环境条件(如温度或重金属毒性)有关,这表明在某些情况下,特定的糖可以介导抗应激能力。总的来说,我们的研究结果突出了每种极端环境中存在保守的 EPS 组成模式,这反过来又可以用于在遗传修饰的微生物中工程化生态适应性。

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