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本文引用的文献

1
Equitability, mutual information, and the maximal information coefficient.公平性、互信息和最大信息系数。
Proc Natl Acad Sci U S A. 2014 Mar 4;111(9):3354-9. doi: 10.1073/pnas.1309933111. Epub 2014 Feb 18.
2
Detecting novel associations in large data sets.在大型数据集 中检测新的关联。
Science. 2011 Dec 16;334(6062):1518-24. doi: 10.1126/science.1205438.
3
Maximum likelihood wavelet density estimation with applications to image and shape matching.用于图像与形状匹配的最大似然小波密度估计
IEEE Trans Image Process. 2008 Apr;17(4):458-68. doi: 10.1109/TIP.2008.918038.
4
Relative performance of mutual information estimation methods for quantifying the dependence among short and noisy data.用于量化短时间和噪声数据之间依赖性的互信息估计方法的相对性能。
Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Aug;76(2 Pt 2):026209. doi: 10.1103/PhysRevE.76.026209. Epub 2007 Aug 14.
5
Estimating mutual information using B-spline functions--an improved similarity measure for analysing gene expression data.使用B样条函数估计互信息——一种用于分析基因表达数据的改进相似性度量。
BMC Bioinformatics. 2004 Aug 31;5:118. doi: 10.1186/1471-2105-5-118.
6
Estimating mutual information.估计互信息。
Phys Rev E Stat Nonlin Soft Matter Phys. 2004 Jun;69(6 Pt 2):066138. doi: 10.1103/PhysRevE.69.066138. Epub 2004 Jun 23.
7
The mutual information: detecting and evaluating dependencies between variables.互信息:检测和评估变量之间的依赖性。
Bioinformatics. 2002;18 Suppl 2:S231-40. doi: 10.1093/bioinformatics/18.suppl_2.s231.
8
Estimation of mutual information using kernel density estimators.使用核密度估计器估计互信息。
Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics. 1995 Sep;52(3):2318-2321. doi: 10.1103/physreve.52.2318.
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Independent coordinates for strange attractors from mutual information.基于互信息的奇异吸引子的独立坐标
Phys Rev A Gen Phys. 1986 Feb;33(2):1134-1140. doi: 10.1103/physreva.33.1134.
10
Reading a neural code.解读神经编码。
Science. 1991 Jun 28;252(5014):1854-7. doi: 10.1126/science.2063199.

刀切法估计互信息。

Jackknife approach to the estimation of mutual information.

机构信息

Department of Statistics and Applied Probability, National University of Singapore, Singapore 117546.

Department of Statistics and Applied Probability, National University of Singapore, Singapore 117546;

出版信息

Proc Natl Acad Sci U S A. 2018 Oct 2;115(40):9956-9961. doi: 10.1073/pnas.1715593115. Epub 2018 Sep 17.

DOI:10.1073/pnas.1715593115
PMID:30224466
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6176556/
Abstract

Quantifying the dependence between two random variables is a fundamental issue in data analysis, and thus many measures have been proposed. Recent studies have focused on the renowned mutual information (MI) [Reshef DN, et al. (2011) 334:1518-1524]. However, "Unfortunately, reliably estimating mutual information from finite continuous data remains a significant and unresolved problem" [Kinney JB, Atwal GS (2014) 111:3354-3359]. In this paper, we examine the kernel estimation of MI and show that the bandwidths involved should be equalized. We consider a jackknife version of the kernel estimate with equalized bandwidth and allow the bandwidth to vary over an interval. We estimate the MI by the largest value among these kernel estimates and establish the associated theoretical underpinnings.

摘要

量化两个随机变量之间的相关性是数据分析中的一个基本问题,因此已经提出了许多度量方法。最近的研究集中在著名的互信息(MI)上[Reshef DN,等(2011)334:1518-1524]。然而,“不幸的是,从有限的连续数据中可靠地估计互信息仍然是一个重要且未解决的问题”[Kinney JB,Atwal GS(2014)111:3354-3359]。在本文中,我们研究了 MI 的核估计,并表明所涉及的带宽应该是均衡的。我们考虑了核估计的一种等带宽的刀切版本,并允许带宽在一个区间内变化。我们通过这些核估计中的最大值来估计 MI,并建立了相关的理论基础。