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模型跨膜肽的波长选择荧光:界面色氨酸锚定的约束动力学。

Wavelength-Selective Fluorescence of a Model Transmembrane Peptide: Constrained Dynamics of Interfacial Tryptophan Anchors.

机构信息

CSIR-Indian Institute of Chemical Technology, Uppal Road, Hyderabad, 500 007, India.

Academy of Scientific and Innovative Research, Ghaziabad, India.

出版信息

J Fluoresc. 2018 Nov;28(6):1317-1323. doi: 10.1007/s10895-018-2293-5. Epub 2018 Sep 17.

DOI:10.1007/s10895-018-2293-5
PMID:30225736
Abstract

WALPs are prototypical, α-helical transmembrane peptides that represent a consensus sequence for transmembrane segments of integral membrane proteins and serve as excellent models for exploring peptide-lipid interactions and hydrophobic mismatch in membranes. Importantly, the WALP peptides are in direct contact with the lipids. They consist of a central stretch of alternating hydrophobic alanine and leucine residues capped at both ends by tryptophans. In this work, we employ wavelength-selective fluorescence approaches to explore the intrinsic fluorescence of tryptophan residues in WALP23 in 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) membranes. Our results show that the four tryptophan residues in WALP23 exhibit an average red edge excitation shift (REES) of 6 nm, implying their localization at the membrane interface, characterized by a restricted microenvironment. This result is supported by fluorescence anisotropy and lifetime measurements as a function of wavelength displayed by WALP23 tryptophans in POPC membranes. These results provide a new approach based on intrinsic fluorescence of interfacial tryptophans to address protein-lipid interaction and hydrophobic mismatch.

摘要

WALPs 是典型的α-螺旋跨膜肽,代表了完整膜蛋白跨膜片段的共识序列,是探索肽-脂相互作用和膜中疏水性失配的优秀模型。重要的是,WALP 肽与脂质直接接触。它们由中央伸展的交替疏水丙氨酸和亮氨酸残基组成,两端由色氨酸封闭。在这项工作中,我们采用波长选择性荧光方法来研究 WALP23 中色氨酸残基在 1-棕榈酰基-2-油酰基-sn-甘油-3-磷酸胆碱(POPC)膜中的固有荧光。我们的结果表明,WALP23 中的四个色氨酸残基表现出平均红边激发位移(REES)为 6nm,这意味着它们定位于膜界面处,其特征是受限的微环境。这一结果得到了 WALP23 色氨酸在 POPC 膜中荧光各向异性和波长依赖性寿命测量的支持。这些结果提供了一种基于界面色氨酸固有荧光的新方法,用于解决蛋白质-脂相互作用和疏水性失配问题。

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引用本文的文献

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本文引用的文献

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Aggregation Behavior of pHLIP in Aqueous Solution at Low Concentrations: A Fluorescence Study.低浓度下pHLIP在水溶液中的聚集行为:荧光研究
J Fluoresc. 2018 Jul;28(4):967-973. doi: 10.1007/s10895-018-2260-1. Epub 2018 Jun 29.
2
Constrained dynamics of the sole tryptophan in the third intracellular loop of the serotonin receptor.血清素受体第三细胞内环中色氨酸的约束动力学。
Biophys Chem. 2018 Sep;240:34-41. doi: 10.1016/j.bpc.2018.05.008. Epub 2018 Jun 1.
3
Sensing Tryptophan Microenvironment of Amyloid Protein Utilizing Wavelength-Selective Fluorescence Approach.
利用波长选择性荧光方法探测淀粉样蛋白的色氨酸微环境。
J Fluoresc. 2017 Nov;27(6):1995-2000. doi: 10.1007/s10895-017-2138-7. Epub 2017 Jul 7.
4
How Peptide Molecular Structure and Charge Influence the Nanostructure of Lipid Bicontinuous Cubic Mesophases: Model Synthetic WALP Peptides Provide Insights.肽分子结构和电荷如何影响脂质双连续立方相的纳米结构:模型合成的 WALP 肽提供了见解。
Langmuir. 2016 Jul 12;32(27):6882-94. doi: 10.1021/acs.langmuir.6b01058. Epub 2016 Jun 30.
5
Juxta-terminal Helix Unwinding as a Stabilizing Factor to Modulate the Dynamics of Transmembrane Helices.末端螺旋展开作为稳定因子调节跨膜螺旋动力学。
Chembiochem. 2016 Mar 15;17(6):462-5. doi: 10.1002/cbic.201500656. Epub 2016 Feb 10.
6
Wavelength-selective fluorescence as a novel tool to study organization and dynamics in complex biological systems.波长选择荧光作为研究复杂生物系统组织和动态的新工具。
J Fluoresc. 1995 Sep;5(3):237-46. doi: 10.1007/BF00723895.
7
Importance of indole N-H hydrogen bonding in the organization and dynamics of gramicidin channels.吲哚N-H氢键在短杆菌肽通道的结构组织和动力学中的重要性。
Biochim Biophys Acta. 2014 Jan;1838(1 Pt B):419-28. doi: 10.1016/j.bbamem.2013.10.011. Epub 2013 Oct 19.
8
Dynamic insight into protein structure utilizing red edge excitation shift.利用红边激发位移技术获得蛋白质结构的动态洞察力。
Acc Chem Res. 2014 Jan 21;47(1):12-9. doi: 10.1021/ar400006z. Epub 2013 Aug 28.
9
Tyrosine replacing tryptophan as an anchor in GWALP peptides.色氨酸被酪氨酸取代作为 GWALP 肽的锚点。
Biochemistry. 2012 Mar 13;51(10):2044-53. doi: 10.1021/bi201732e. Epub 2012 Mar 5.
10
Fluid phase lipid areas and bilayer thicknesses of commonly used phosphatidylcholines as a function of temperature.常用磷脂酰胆碱的液相脂质面积和双层厚度随温度的变化关系。
Biochim Biophys Acta. 2011 Nov;1808(11):2761-71. doi: 10.1016/j.bbamem.2011.07.022. Epub 2011 Jul 23.