Department of Chemistry, University of Southern California, Los Angeles, CA 90089.
Department of Physiology and Membrane Biology, University of California, Davis, CA 95616.
Proc Natl Acad Sci U S A. 2018 Oct 9;115(41):10327-10332. doi: 10.1073/pnas.1810316115. Epub 2018 Sep 26.
G-protein-coupled receptors (GPCRs) are a large group of membrane-bound receptor proteins that are involved in a plethora of diverse processes (e.g., vision, hormone response). In mammals, and particularly in humans, GPCRs are involved in many signal transduction pathways and, as such, are heavily studied for their immense pharmaceutical potential. Indeed, a large fraction of drugs target various GPCRs, and drug-development is often aimed at GPCRs. Therefore, understanding the activation of GPCRs is a challenge of major importance both from fundamental and practical considerations. And yet, despite the remarkable progress in structural understanding, we still do not have a translation of the structural information to an energy-based picture. Here we use coarse-grained (CG) modeling to chart the free-energy landscape of the activation process of the β-2 adrenergic receptor (βAR) as a representative GPCR. The landscape provides the needed tool for analyzing the processes that lead to activation of the receptor upon binding of the ligand (adrenaline) while limiting constitutive activation. Our results pave the way to better understand the biological mechanisms of action of the βAR and GPCRs, from a physical chemistry point of view rather than simply by observing the receptor's behavior physiologically.
G 蛋白偶联受体(GPCRs)是一大类膜结合受体蛋白,参与了众多不同的过程(例如视觉、激素反应)。在哺乳动物中,特别是在人类中,GPCRs 参与了许多信号转导途径,因此,由于其巨大的药物潜力,它们受到了广泛的研究。事实上,很大一部分药物针对各种 GPCRs,药物开发通常针对 GPCRs。因此,从基础和实际考虑来看,理解 GPCR 的激活是一个非常重要的挑战。然而,尽管在结构理解方面取得了显著进展,但我们仍然没有将结构信息转化为基于能量的图像。在这里,我们使用粗粒化(CG)建模来绘制 β-2 肾上腺素能受体(βAR)作为代表性 GPCR 的激活过程的自由能景观。该景观为分析配体(肾上腺素)结合导致受体激活的过程提供了必要的工具,同时限制了组成性激活。我们的结果为从物理化学的角度而不是仅仅从生理学上观察受体的行为来更好地理解 βAR 和 GPCR 的生物学作用机制铺平了道路。