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一种用于精确视网膜血管分割的三阶段深度学习模型。

A Three-Stage Deep Learning Model for Accurate Retinal Vessel Segmentation.

出版信息

IEEE J Biomed Health Inform. 2019 Jul;23(4):1427-1436. doi: 10.1109/JBHI.2018.2872813. Epub 2018 Sep 28.

DOI:10.1109/JBHI.2018.2872813
PMID:30281503
Abstract

Automatic retinal vessel segmentation is a fundamental step in the diagnosis of eye-related diseases, in which both thick vessels and thin vessels are important features for symptom detection. All existing deep learning models attempt to segment both types of vessels simultaneously by using a unified pixel-wise loss that treats all vessel pixels with equal importance. Due to the highly imbalanced ratio between thick vessels and thin vessels (namely the majority of vessel pixels belong to thick vessels), the pixel-wise loss would be dominantly guided by thick vessels and relatively little influence comes from thin vessels, often leading to low segmentation accuracy for thin vessels. To address the imbalance problem, in this paper, we explore to segment thick vessels and thin vessels separately by proposing a three-stage deep learning model. The vessel segmentation task is divided into three stages, namely thick vessel segmentation, thin vessel segmentation, and vessel fusion. As better discriminative features could be learned for separate segmentation of thick vessels and thin vessels, this process minimizes the negative influence caused by their highly imbalanced ratio. The final vessel fusion stage refines the results by further identifying nonvessel pixels and improving the overall vessel thickness consistency. The experiments on public datasets DRIVE, STARE, and CHASE_DB1 clearly demonstrate that the proposed three-stage deep learning model outperforms the current state-of-the-art vessel segmentation methods.

摘要

自动视网膜血管分割是眼部疾病诊断的基础步骤,其中粗血管和细血管都是用于症状检测的重要特征。所有现有的深度学习模型都试图通过使用统一的像素级损失来同时分割这两种类型的血管,这种损失同等对待所有血管像素。由于粗血管和细血管之间的高度不平衡比例(即大多数血管像素属于粗血管),像素级损失主要受粗血管引导,而细血管的影响相对较小,这通常导致细血管的分割精度较低。为了解决这种不平衡问题,本文提出了一种三阶段深度学习模型,通过分别分割粗血管和细血管来解决这个问题。血管分割任务分为三个阶段,即粗血管分割、细血管分割和血管融合。由于可以为粗血管和细血管的单独分割学习更好的判别特征,因此这个过程最小化了它们高度不平衡比例造成的负面影响。最后的血管融合阶段通过进一步识别非血管像素和提高整体血管厚度一致性来细化结果。在公共数据集 DRIVE、STARE 和 CHASE_DB1 上的实验结果表明,所提出的三阶段深度学习模型优于当前最先进的血管分割方法。

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