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巴西东北部犬血清病毒组学特征分析。

Characterization of dog serum virome from Northeastern Brazil.

机构信息

Laboratório de Virologia, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, Rio Grande do Sul, Brazil.

Laboratório de Biologia Molecular, Instituto de Pesquisas Veterinárias Desidério Finamor (IPVDF), Secretaria da Agricultura, Pecuária e Irrigação do Rio Grande do Sul (SEAPI-RS), Eldorado do Sul, Rio Grande do Sul, Brazil.

出版信息

Virology. 2018 Dec;525:192-199. doi: 10.1016/j.virol.2018.09.023. Epub 2018 Oct 4.

Abstract

Domestic dogs share habitats with human, a fact that makes them a potential source of zoonotic viruses. Moreover, knowledge regarding possible bloodborne pathogens is important due to the increasing application of blood transfusion in dogs. In the present study, we evaluated the serum virome of 520 dogs using throughput sequencing (HTS). The serum samples were pooled and sequenced using an Illumina MiSeq platform. Our unbiased method identified prevalent canine pathogens as canine protoparvovirus 1 (canine parvovirus 2), undersearched agents as canine bocaparvovirus 1 (minute virus of canines) and canine circovirus, circular viruses closely related to viruses recently found in human samples, and new parvovirus and anelloviruses. The dog virome described in the present work furthers the knowledge concerning the viral population in domestic animals. The present data includes information regarding viral agents that are potentially transmitted through blood transfusion among dogs.

摘要

家犬与人类生活在同一环境中,这使它们成为人畜共患病病毒的潜在来源。此外,由于犬类输血的应用越来越多,了解可能存在的血源性病原体非常重要。在本研究中,我们使用高通量测序(HTS)对 520 只犬的血清病毒组进行了评估。将血清样本混合,并使用 Illumina MiSeq 平台进行测序。我们的无偏方法鉴定出常见的犬病原体,如犬细小病毒 1(犬细小病毒 2),以及研究较少的犬博卡病毒 1(微小犬病毒)和犬圆环病毒,这些环状病毒与最近在人类样本中发现的病毒密切相关,还有新的细小病毒和圆环病毒。本研究中描述的犬病毒组进一步了解了家畜中的病毒群体。本数据包括了通过犬类输血传播的潜在病毒因子的信息。

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