Department of Biological Chemistry, John Innes Centre, Colney Lane, Norwich, NR4 7UH, UK.
Department of Plant Biology, Michigan State University, East Lansing, MI, 48824, USA.
Chembiochem. 2019 Jan 2;20(1):83-87. doi: 10.1002/cbic.201800592. Epub 2018 Nov 13.
Genome mining is a routine technique in microbes for discovering biosynthetic pathways. In plants, however, genomic information is not commonly used to identify novel biosynthesis genes. Here, we present the genome of the medicinal plant and oxindole monoterpene indole alkaloid (MIA) producer Gelsemium sempervirens (Gelsemiaceae). A gene cluster from Catharanthus roseus, which is utilized at least six enzymatic steps downstream from the last common intermediate shared between the two plant alkaloid types, is found in G. sempervirens, although the corresponding enzymes act on entirely different substrates. This study provides insights into the common genomic context of MIA pathways and is an important milestone in the further elucidation of the Gelsemium oxindole alkaloid pathway.
基因组挖掘是微生物中发现生物合成途径的常规技术。然而,在植物中,基因组信息通常不用于鉴定新的生物合成基因。在这里,我们介绍了药用植物和氧化吲哚单萜吲哚生物碱(MIA)生产植物钩吻(钩吻科)的基因组。在钩吻中发现了长春花(Catharanthus roseus)的基因簇,该基因簇至少利用了两种植物生物碱类型共有的最后一个共同中间产物的六个下游酶步骤,尽管相应的酶作用于完全不同的底物。这项研究深入了解了 MIA 途径的常见基因组背景,是进一步阐明钩吻氧化吲哚生物碱途径的重要里程碑。