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中国土壤微生物分类和功能特性对汞污染的一致响应。

Consistent responses of soil microbial taxonomic and functional attributes to mercury pollution across China.

机构信息

State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China.

State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, 100085, China.

出版信息

Microbiome. 2018 Oct 18;6(1):183. doi: 10.1186/s40168-018-0572-7.

Abstract

BACKGROUND

The ecological consequences of mercury (Hg) pollution-one of the major pollutants worldwide-on microbial taxonomic and functional attributes remain poorly understood and largely unexplored. Using soils from two typical Hg-impacted regions across China, here, we evaluated the role of Hg pollution in regulating bacterial abundance, diversity, and co-occurrence network. We also investigated the associations between Hg contents and the relative abundance of microbial functional genes by analyzing the soil metagenomes from a subset of those sites.

RESULTS

We found that soil Hg largely influenced the taxonomic and functional attributes of microbial communities in the two studied regions. In general, Hg pollution was negatively related to bacterial abundance, but positively related to the diversity of bacteria in two separate regions. We also found some consistent associations between soil Hg contents and the community composition of bacteria. For example, soil total Hg content was positively related to the relative abundance of Firmicutes and Bacteroidetes in both paddy and upland soils. In contrast, the methylmercury (MeHg) concentration was negatively correlated to the relative abundance of Nitrospirae in the two types of soils. Increases in soil Hg pollution correlated with drastic changes in the relative abundance of ecological clusters within the co-occurrence network of bacterial communities for the two regions. Using metagenomic data, we were also able to detect the effect of Hg pollution on multiple functional genes relevant to key soil processes such as element cycles and Hg transformations (e.g., methylation and reduction).

CONCLUSIONS

Together, our study provides solid evidence that Hg pollution has predictable and significant effects on multiple taxonomic and functional attributes including bacterial abundance, diversity, and the relative abundance of ecological clusters and functional genes. Our results suggest an increase in soil Hg pollution linked to human activities will lead to predictable shifts in the taxonomic and functional attributes in the Hg-impacted areas, with potential implications for sustainable management of agricultural ecosystems and elsewhere.

摘要

背景

汞(Hg)污染是全球主要污染物之一,其对微生物分类和功能属性的生态后果仍知之甚少,且在很大程度上尚未得到探索。本研究使用来自中国两个典型 Hg 污染地区的土壤,评估了 Hg 污染对细菌丰度、多样性和共生网络的调控作用。我们还通过分析部分位点的土壤宏基因组,研究了 Hg 含量与微生物功能基因相对丰度之间的关联。

结果

我们发现土壤 Hg 极大地影响了两个研究区域中微生物群落的分类和功能属性。一般来说,Hg 污染与细菌丰度呈负相关,但与两个独立区域中细菌的多样性呈正相关。我们还发现土壤 Hg 含量与细菌群落组成之间存在一些一致的关联。例如,土壤总 Hg 含量与水田和旱地土壤中厚壁菌门和拟杆菌门的相对丰度呈正相关。相反,甲基汞(MeHg)浓度与两种土壤中硝化螺旋菌的相对丰度呈负相关。随着土壤 Hg 污染的增加,两个地区细菌群落共生网络中生态类群的相对丰度发生了剧烈变化。利用宏基因组数据,我们还能够检测到 Hg 污染对多个与元素循环和 Hg 转化(如甲基化和还原)等关键土壤过程相关的功能基因的影响。

结论

总之,本研究提供了确凿的证据表明,Hg 污染对包括细菌丰度、多样性以及生态类群和功能基因相对丰度在内的多个分类和功能属性具有可预测的显著影响。我们的研究结果表明,与人类活动相关的土壤 Hg 污染增加将导致 Hg 污染区的分类和功能属性发生可预测的变化,这可能对农业生态系统和其他领域的可持续管理产生影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/940f/6194565/82e85c0701d7/40168_2018_572_Fig1_HTML.jpg

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