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(Na1.5) Variant Functional Perturbation and Clinical Presentation: Variants of a Certain Significance.(Na1.5) 变异功能性扰动与临床表现:具有一定意义的变异。
Circ Genom Precis Med. 2018 May;11(5):e002095. doi: 10.1161/CIRCGEN.118.002095.
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Using high-resolution variant frequencies to empower clinical genome interpretation.利用高分辨率变异频率增强临床基因组解读。
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Genet Med. 2017 Nov;19(11):1245-1252. doi: 10.1038/gim.2017.40. Epub 2017 May 4.
9
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10
Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.序列变异解读的标准与指南:美国医学遗传学与基因组学学会和分子病理学协会的联合共识推荐
Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

心血管遗传学的成长之痛。

Growing Pains in Cardiovascular Genetics.

机构信息

Departments of Medicine, Pharmacology, and Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN.

出版信息

Circulation. 2018 Sep 18;138(12):1206-1209. doi: 10.1161/CIRCULATIONAHA.118.035933.

DOI:10.1161/CIRCULATIONAHA.118.035933
PMID:30354441
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6206881/
Abstract

Over half a century ago, heart specialists – there were no board certified cardiologists yet – began to report unusual phenotypes like very long QT intervals or extraordinary left ventricular hypertrophy that ran in families and caused sudden death in the young. In the 1980s and 90s, linkage analysis in large families identified the first disease genes, landmark discoveries that have been critical for understanding basic physiologic and pathophysiologic processes in the heart, counselling families, defining penetrance that is so often incomplete, and identifying phenotype positive patients in whom coding region variants in these first disease genes were absent. In those patients, disease pathways defined by early rigorous linkage-based studies implicated new candidate genes for mediating these cardiovascular genetic phenotypes. So, for example, once beta-myosin heavy chain mutations were identified in hypertrophic cardiomyopathy (HCM), genes encoding other contractile proteins became logical candidates; similarly, ion channel genes or modifiers were candidates in channelopathies and desmosomal proteins in arrhythmogenic right ventricular cardiomyopathy (ARVC). As a result, we now have long lists of disease genes for major cardiovascular genetic diseases, and dramatic improvements in sequencing costs and efficiencies have enabled widespread application of panel-based sequencing. While these advances have improved care of affected patients and their families, two papers in the current issue of highlight potential flaws in the logic that underlies increasing use of these panels across large patient populations.

摘要

半个多世纪前,心脏专家——当时还没有经过董事会认证的心脏病专家——开始报告一些不寻常的表型,如非常长的 QT 间期或异常的左心室肥厚,这些表型在家族中出现,并导致年轻人猝死。在 20 世纪 80 年代和 90 年代,大的家族中的连锁分析确定了第一批疾病基因,这些里程碑式的发现对于理解心脏的基本生理和病理生理过程、为家庭提供咨询、定义常常不完全的外显率以及识别这些第一批疾病基因的编码区变异缺失的表型阳性患者都至关重要。在这些患者中,早期严格基于连锁的研究定义的疾病途径暗示了新的候选基因来介导这些心血管遗传表型。因此,例如,一旦在肥厚型心肌病 (HCM) 中鉴定出β肌球蛋白重链突变,编码其他收缩蛋白的基因就成为合理的候选基因;同样,离子通道基因或调节剂是通道病的候选基因,桥粒蛋白是心律失常性右心室心肌病 (ARVC) 的候选基因。因此,我们现在有了主要心血管遗传疾病的大量疾病基因列表,测序成本和效率的显著提高使得基于面板的测序得到了广泛应用。尽管这些进展改善了受影响患者及其家庭的护理,但本期杂志中的两篇论文强调了在越来越多的大患者群体中使用这些面板所依据的逻辑存在潜在缺陷。