Moisander Pia H, Shoemaker Katyanne M, Daley Meaghan C, McCliment Elizabeth, Larkum Jennifer, Altabet Mark A
Department of Biology, University of Massachusetts Dartmouth, North Dartmouth, MA, United States.
School of Marine Science and Technology, University of Massachusetts Dartmouth, New Bedford, MA, United States.
Front Microbiol. 2018 Oct 10;9:2390. doi: 10.3389/fmicb.2018.02390. eCollection 2018.
Microbial dissimilatory nitrate reduction to nitrite, or nitrate respiration, was detected in association with copepods in the oxygenated water column of the North Atlantic subtropical waters. These unexpected rates correspond to up to 0.09 nmol N copepod d and demonstrate a previously unaccounted nitrogen transformation in the oceanic pelagic surface layers. Genes and transcripts for both the periplasmic and membrane associated dissimilatory nitrate reduction pathways (Nap and Nar, respectively) were detected. The genes and transcripts were closely related with sequences from several clades of sp., while the closest relatives of the sequences were spp. and spp., many of them representing clades only distantly related to previously described cultivated bacteria. The discovered activity demonstrates a novel Gammaproteobacterial respiratory role in copepod association, presumably providing energy for these facultatively anaerobic bacteria, while supporting a reductive path of nitrogen in the oxygenated water column of the open ocean.
在北大西洋亚热带水域的含氧水柱中,检测到与桡足类动物相关的微生物异化硝酸盐还原为亚硝酸盐的过程,即硝酸盐呼吸作用。这些意外的速率高达0.09 nmol N·桡足类动物·天,并证明了海洋中上层表层以前未被考虑的氮转化。检测到了周质和膜相关异化硝酸盐还原途径(分别为Nap和Nar)的基因和转录本。这些基因和转录本与来自几个菌属分支的序列密切相关,而这些序列的最接近亲缘种是某些菌属和某些菌属,其中许多代表的分支与先前描述的培养细菌只有远缘关系。所发现的活性表明γ-变形菌在与桡足类动物的关联中具有一种新的呼吸作用,大概为这些兼性厌氧菌提供能量,同时支持公海含氧水柱中的氮还原途径。