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反向回旋酶的内在依赖DNA的ATP酶活性。

Intrinsic DNA-dependent ATPase activity of reverse gyrase.

作者信息

Shibata T, Nakasu S, Yasui K, Kikuchi A

出版信息

J Biol Chem. 1987 Aug 5;262(22):10419-21.

PMID:3038879
Abstract

Reverse gyrase is a type I DNA topoisomerase that promotes positive supercoiling of closed-circular double-stranded DNA through an ATP-dependent reaction, and it was purified from an archaebacterium, Sulfolobus. When ATP is replaced by UTP, GTP, or CTP, this enzyme just relaxes the negatively supercoiled closed-circular double-stranded DNA. We found that reverse gyrase hydrolyzes ATP through a double-stranded DNA-dependent reaction. The superhelicity of the DNA did not affect the ATPase activity. However, reverse gyrase does not hydrolyze UTP, GTP, or CTP. Therefore, any of the four nucleotide 5'-triphosphates acts as an effector for the topoisomerase activity of reverse gyrase, but only ATP supports the positive supercoiling of closed-circular double-stranded DNA, through the energy released on its hydrolysis. Single-stranded DNA was a much more potent cofactor for the ATPase activity of the enzyme than double-stranded DNA, and it acted as a potent inhibitor for the topoisomerase activity on double-stranded DNA. These results indicate that reverse gyrase has higher affinity to single-stranded DNA than to double-stranded DNA, which suggests a cellular function of the enzyme.

摘要

反向回旋酶是一种I型DNA拓扑异构酶,通过依赖ATP的反应促进闭环双链DNA的正超螺旋化,它是从嗜热栖热菌中纯化得到的。当ATP被UTP、GTP或CTP取代时,这种酶只会使负超螺旋闭环双链DNA松弛。我们发现反向回旋酶通过依赖双链DNA的反应水解ATP。DNA的超螺旋状态不影响ATP酶活性。然而,反向回旋酶不水解UTP、GTP或CTP。因此,四种核苷5'-三磷酸中的任何一种都可作为反向回旋酶拓扑异构酶活性的效应物,但只有ATP通过其水解释放的能量支持闭环双链DNA的正超螺旋化。单链DNA作为该酶ATP酶活性的辅助因子比双链DNA更有效,并且它对双链DNA上的拓扑异构酶活性起强效抑制剂的作用。这些结果表明,反向回旋酶对单链DNA的亲和力高于对双链DNA的亲和力,这提示了该酶的细胞功能。

相似文献

1
Intrinsic DNA-dependent ATPase activity of reverse gyrase.反向回旋酶的内在依赖DNA的ATP酶活性。
J Biol Chem. 1987 Aug 5;262(22):10419-21.
2
Adenosine 5'-O-(3-thio)triphosphate (ATPgammaS) promotes positive supercoiling of DNA by T. maritima reverse gyrase.5'-O-(3-硫代)三磷酸腺苷(ATPγS)可促进海栖热袍菌反向回旋酶对DNA的正向超螺旋化。
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3
Reverse gyrase binding to DNA alters the double helix structure and produces single-strand cleavage in the absence of ATP.反向回旋酶与DNA的结合会改变双螺旋结构,并在没有ATP的情况下产生单链切割。
EMBO J. 1989 Oct;8(10):3135-9. doi: 10.1002/j.1460-2075.1989.tb08466.x.
4
Reverse gyrase of Sulfolobus: purification to homogeneity and characterization.嗜热栖热菌的反向回旋酶:纯化至同质并进行特性鉴定。
Biochemistry. 1988 Dec 27;27(26):9102-8. doi: 10.1021/bi00426a006.
5
The intrinsic ATPase of DNA gyrase.DNA 回旋酶的内在 ATP 酶
J Biol Chem. 1980 Jul 10;255(13):6299-306.
6
Purification and characterization of reverse gyrase from Sulfolobus shibatae. Its proteolytic product appears as an ATP-independent topoisomerase.来自柴田硫化叶菌的反向回旋酶的纯化与特性分析。其蛋白水解产物表现为一种不依赖ATP的拓扑异构酶。
J Biol Chem. 1994 Feb 18;269(7):5255-63.
7
DNA topoisomerase III from extremely thermophilic archaebacteria. ATP-independent type I topoisomerase from Desulfurococcus amylolyticus drives extensive unwinding of closed circular DNA at high temperature.来自极端嗜热古细菌的DNA拓扑异构酶III。来自解淀粉脱硫球菌的不依赖ATP的I型拓扑异构酶在高温下驱动闭环DNA的大量解旋。
J Biol Chem. 1991 Jul 5;266(19):12321-8.
8
DNA gyrase and the supercoiling of DNA.DNA 回旋酶与 DNA 的超螺旋化
Science. 1980 Feb 29;207(4434):953-60. doi: 10.1126/science.6243420.
9
DNA substrate specificity of reverse gyrase from extremely thermophilic archaebacteria.极端嗜热古细菌中反向回旋酶的DNA底物特异性
J Biomol Struct Dyn. 1990 Feb;7(4):935-42. doi: 10.1080/07391102.1990.10508533.
10
Reverse gyrase functions as a DNA renaturase: annealing of complementary single-stranded circles and positive supercoiling of a bubble substrate.反向回旋酶作为一种DNA复性酶发挥作用:互补单链环的退火和气泡底物的正超螺旋化。
J Biol Chem. 2006 Mar 3;281(9):5640-7. doi: 10.1074/jbc.M513252200. Epub 2006 Jan 3.

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Extremophiles. 2011 Mar;15(2):281-91. doi: 10.1007/s00792-011-0356-5. Epub 2011 Feb 12.
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The reverse gyrase helicase-like domain is a nucleotide-dependent switch that is attenuated by the topoisomerase domain.反向回旋酶解旋酶样结构域是一种核苷酸依赖性开关,其活性受到拓扑异构酶结构域的抑制。
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Crystal structure of reverse gyrase: insights into the positive supercoiling of DNA.反向回旋酶的晶体结构:对DNA正超螺旋的见解。
EMBO J. 2002 Feb 1;21(3):418-26. doi: 10.1093/emboj/21.3.418.
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Reverse gyrase gene from Sulfolobus shibatae B12: gene structure, transcription unit and comparative sequence analysis of the two domains.来自嗜热栖热菌B12的反向回旋酶基因:基因结构、转录单元及两个结构域的比较序列分析
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