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从头设计自组装螺旋状蛋白丝。

De novo design of self-assembling helical protein filaments.

机构信息

Institute for Protein Design, University of Washington, Seattle, WA 98195, USA.

Department of Biochemistry, University of Washington, Seattle, WA 98195, USA.

出版信息

Science. 2018 Nov 9;362(6415):705-709. doi: 10.1126/science.aau3775.

Abstract

We describe a general computational approach to designing self-assembling helical filaments from monomeric proteins and use this approach to design proteins that assemble into micrometer-scale filaments with a wide range of geometries in vivo and in vitro. Cryo-electron microscopy structures of six designs are close to the computational design models. The filament building blocks are idealized repeat proteins, and thus the diameter of the filaments can be systematically tuned by varying the number of repeat units. The assembly and disassembly of the filaments can be controlled by engineered anchor and capping units built from monomers lacking one of the interaction surfaces. The ability to generate dynamic, highly ordered structures that span micrometers from protein monomers opens up possibilities for the fabrication of new multiscale metamaterials.

摘要

我们描述了一种通用的计算方法,用于设计由单体蛋白自组装成的螺旋丝,并利用这种方法设计了在体内和体外能组装成具有广泛几何形状的微米级纤维的蛋白。六种设计的低温电子显微镜结构与计算设计模型非常接近。这些纤维的构建模块是理想化的重复蛋白,因此通过改变重复单元的数量可以系统地调节纤维的直径。通过利用缺乏一个相互作用表面的单体构建的工程化锚定和封顶单元,可以控制纤维的组装和拆卸。从蛋白单体生成跨越微米尺度的动态、高度有序结构的能力为制造新型多尺度的超材料开辟了可能性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c326/6637945/4556dec70929/nihms-1022408-f0001.jpg

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